Magallana gigas (Pacific oyster): 105325028
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Entry
105325028 CDS
T03920
Name
(RefSeq) cell adhesion molecule 2 isoform X1
KO
K06781
cell adhesion molecule 1
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crg04515
]
105325028
Cell adhesion molecules [BR:
crg04515
]
Immunoglobulin superfamily
Nectin family
105325028
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
V-set
C2-set_2
Podoplanin
DUF6479
VSP
ECSCR
DUF4690
SPAR
DUF4232
CYYR1
EphA2_TM
DUF6121
Insulin_TMD
CR_prot_dom_plant
V-set_CD47
MtrF
Motif
Other DBs
NCBI-GeneID:
105325028
NCBI-ProteinID:
XP_011422692
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All DBs
Position
2:complement(55491008..55504380)
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AA seq
533 aa
AA seq
DB search
MDLFRRFSCILFLSTLFIQGRDCGTVQTSASVTATNGSSVNLTCEYTLDPGDSVYSGLIV
WETKKSGTSEYENIATFSPPGEGSNSFTTTESAMNLKDRAELLNVTSTGSNTYRAVMRVL
EVQCLDEKEYRCSVTFRTSNLGPQTETAVTSLTVQAPAERPYDIPVAEPSNIEENMKINL
SCTANVGKPPGKIKWWRYRDQVNAPLLMEESSEIPVVQPGVCVYNVTFSIQPVVTKDDDQ
SVWRCSVDNELVTGSPDQNKPNQETARINVFYKVRVPQITKTPDTPNSQYSVGSSVNLTC
KAEGNPSPSIHIDKNVNKYVWTFKANPGDNATELSSNEGVLSLTNLQETDTGTYTCTAFN
GFNGKTFNSSQHQELQIVKTTTTSAPTTTPFVSTTGPTGNPGTESREEDTTGGLSGGAIA
GIVIGVIVILVLVVVAALCLICRNRQSKGDSIDEPPEKPIRNNQDLSFVNRPDIVNNDKS
SPFYSQEKKHNTDLHYSDLTFDDKPRSRKPIQIYDLNGLNNSPYSSEVMMPSV
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggatttatttcgacggttttcgtgtattttatttttatcaacattattcatccaagga
cgagattgtggaacagttcaaacttcagcatcggtcacagctacaaatggatcatctgtg
aatttaacttgtgaatatactttagacccaggtgattcagtgtacagtgggcttattgtc
tgggaaaccaagaaatcagggacatcagaatatgagaatattgccacattttcacctcct
ggagaagggagcaactcttttaccaccacagaatctgccatgaatcttaaagatcgagcg
gaattactgaatgtaacttccactggttcaaacacttatcgtgccgtgatgagagttctt
gaagtgcagtgtttggatgagaaagaataccgatgttctgttacctttagaacttcaaat
cttggtccccagacagaaactgcagtaacttcacttacagttcaagcacctgcagaaaga
ccctatgatatccctgttgctgaacctagtaatatcgaggaaaacatgaaaatcaacctc
tcctgtaccgctaatgttggtaaacctcctggaaagatcaagtggtggcgctacagagat
caggtcaatgcaccgttattaatggaggagtcctcggaaatccctgtggtgcagcctgga
gtgtgtgtttacaacgtgaccttctccatacaacctgttgtcaccaaggacgacgaccag
tccgtgtggagatgttctgtagacaatgaactggtgaccggctcacctgaccaaaacaag
cctaaccaagaaactgctagaattaatgtcttctataaagttagggttccacaaataacc
aaaaccccagacaccccgaactcccagtattctgttggctcttctgtaaacttgacctgc
aaagctgaaggtaacccaagtccttccatccatattgataagaatgtcaacaagtatgta
tggacgttcaaggccaatccaggagacaatgcaacggaattgtcatcaaacgaaggagtc
ctcagtctgaccaatctacaggagaccgacactgggacatacacatgtacagccttcaat
gggttcaatggaaaaacgttcaacagctctcaacaccaggaacttcaaatagtaaaaaca
accaccacttctgctcccactactacaccttttgtgtccactacaggcccgaccggaaat
cccggaacagagtcgcgggaagaagatactacaggcgggttatcagggggggccatagct
ggtattgtgattggggtcattgtcatcctggtcctcgtggtggtagccgcgctctgctta
atctgtagaaacaggcagtcaaagggagactccatagacgaacctccagagaaaccaata
agaaataaccaagacctgagctttgtgaacagaccagacattgtcaataacgataaatcc
tcaccgttctattctcaagaaaagaaacacaacacagatctgcattactctgatttaaca
tttgacgacaaacccagaagtcggaaacctatccaaatatacgacctgaatgggctcaac
aacagcccgtactcatcagaagtgatgatgcccagtgtgtga
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