Magallana gigas (Pacific oyster): 105325121
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Entry
105325121 CDS
T03920
Name
(RefSeq) target of EGR1 protein 1 isoform X1
KO
K13202
target of EGR1 protein 1
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crg03041
]
105325121
Spliceosome [BR:
crg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105325121
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
105325121
NCBI-ProteinID:
XP_011422816
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Position
7:complement(8137360..8161453)
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AA seq
477 aa
AA seq
DB search
MSVRFESIPVLDVNINNIQVLWPSLMKAVESATFIAIDTELSGIGTRKTLMAKSVEDRYK
GTAENAKTRSVVSLGLSCFKLTHVDVKPRTQTGNMSDDSFLEASPSSSCHTWNFLVQTYN
IMALCQEEYVVEPSSLKFLVEHGFDFNKQYSCGVGYYRGNDKPNPTSSSMCLRSFFTVLV
KSRKPVVFHNALTDLVYLYQNFYASLPPTMSSFIADLTEIFEGGVYDTKYITDYVHRMPA
SYLEYVFRKSQRDNTQRQSTERSSVTINILPYPPSETVNHCRCGLPPDSLQDKDPDQDTF
QAIKDHICQGFAGHGWCSSGNRCNKSHDIDLILDVDHLVQTRKSRKRKRRNRNQNQEDGD
SDESQEPASKQYTKDQFEEFLSKRLGDREICKAGCHRAGFDSFMTGFSFAVYISKYGSYN
GSFCLDDCGMEAFKNNVYLSGKDMPLSIVKSTFSKTSKNHKEKIKKISEHVDNSEKF
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcaggttcgagtccatcccagtcctggatgtaaacataaacaacatccaagtc
ctttggccatcattaatgaaagctgtggaatcagcaacatttatagcaatagatacagaa
ttaagtggaattggtaccagaaagacactaatggccaaatcagtagaggatcgatacaaa
ggaactgcagaaaatgctaaaactcgatcagtagtctcccttggtctgtcctgtttcaag
ctgacacatgtcgacgtgaagcccaggacacaaactggaaacatgtcagacgattcgttc
ctcgaggccagcccttcctcgagctgccatacgtggaacttcttagtccagacgtataac
atcatggctctgtgtcaggaggagtatgtcgtggagccctcctccctcaagttccttgtc
gagcatggcttcgacttcaacaagcaatactcctgtggagtaggctactacagaggcaat
gacaagccaaaccctacatccagtagcatgtgtctgaggtctttcttcacagtattggtg
aagtctcggaagccggtggtgttccacaacgccctcacggacctagtgtatctgtaccag
aacttctacgccagtctccctccaaccatgtcctcctttatcgcggatctgacggagatt
ttcgagggtggcgtgtacgacaccaagtacatcacagactatgtccatcgaatgcccgcc
tcatacctggaatatgtgttcagaaagagtcagagagataacacacagagacagagcaca
gagaggtcgtctgtgaccatcaacatcctgccctaccccccgagcgagacggtcaaccac
tgtcggtgtggcctccccccggacagcctacaggacaaggacccggaccaggacaccttc
caggccatcaaagaccacatctgtcagggattcgccggacatggttggtgttctagtggg
aacagatgtaacaagtcacatgacatagacctgattctagacgtggaccacctggtgcaa
acacgaaaaagtcgcaaacgaaagcggaggaaccgtaaccaaaatcaggaggatggagac
agtgatgagagccaagaaccagccagcaaacagtacacaaaggaccagtttgaagaattc
ctgtcaaagaggctcggtgatagagagatctgcaaggcaggttgccatagagcaggtttt
gattctttcatgacgggattctcgtttgcagtgtacatttccaaatatggaagttacaat
ggcagtttttgtctggacgactgtggtatggaagctttcaagaacaatgtatacttaagt
ggaaaagacatgcccttgtctattgtgaaaagtactttttccaaaacttctaaaaatcat
aaagagaagatcaagaagatatctgagcatgtagacaattctgagaaattttaa
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