Magallana gigas (Pacific oyster): 105325129
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Entry
105325129 CDS
T03920
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
Organism
crg
Magallana gigas (Pacific oyster)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
NHL
zf-C3HC4_2
Mala_s_1-like
zf-C3HC4
Vgb_lyase
ANCHR-like_BBOX
zf-RING_5
SGL
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
105325129
NCBI-ProteinID:
XP_034302740
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Position
5:52406924..52412608
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AA seq
739 aa
AA seq
DB search
MAEALNRTERDFLLNCGICGGRFTDPRILDCLHSFCKECLVIKQEQATKKDVVICELCGT
HTRLPSDSIDSLTTNIFVTNIGRVEEITNSNCSFYCTFCEGQGDWEEASSRCLTCGDWLC
LACAGRHCGTTVTKRHKVVTLDDVRVDPQHRPELRKLYESKCISHDEKLRKFCSKCETPV
CSECEHSDHKKHTFIPLEDVVEEVRDNLSNALEMYKVLEECDGESDMQMAKRFQEVTNKE
KTLLQIVHSARERLIQEIQQQATAAELAISQPFEAVKMLLSESMELEKKRSESTQKSRLF
CEKLQQEGLKGECVHFRDLLQRVKKGDRKRAQLEFPPMPEINVNVNELSFPTIFSVSVSE
QRPVSQLEIPRVKSAVVMTGSVNERLQENLYTRQRGNNAERIPTPEARGDKPKTDFPESG
AAGTDHQSHPQEVEFKGCEEVEDSDVEETEDDDDADNNANRRPFNVPVVPRKSEKTVDDE
GIIATLNVNDFQIISLSTIHDKNSPEIFDIAWLTDTEFAVGDKANQTIKVFQDGGEFLWQ
KYIQEGLIDRIACVDGVVASDFPSGVHLDMRNESFTKIYYQSTTNRTNPYPIAKTIGKEV
IIGNADFPELRCYTTKGKRIRYLPLGKKLKINYIALNENKAFFFTEKNSTIVKKFQEGQG
ISKFFDGLPGWVPEGVATDSENNVYVSDSAGSDIVKLSPQGKLLGILEVHPTSPRGMSIS
RQNQLLVCDGEGRAWLVHI
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgttaaacagaacagagcgagattttctattgaattgtggaatatgcgga
gggaggtttacggatccgcgtattttagactgcctgcactctttctgtaaagaatgtctt
gttattaaacaggaacaagctacaaagaaagacgtcgttatttgcgaactttgcggaact
cacacacgtttgcccagtgattctattgactctctgacgaccaacatctttgtaacgaac
ataggaagagtggaggagatcaccaactccaactgcagtttttattgcactttctgtgaa
ggccagggtgactgggaagaggcatcatctcgctgtttgacctgcggtgattggctgtgt
ctggcgtgtgccgggcgtcactgcggcaccacggtcaccaagcgtcacaaggtggtgacg
cttgacgatgtaagagtagacccccaacacaggccagagctccgaaaactatatgagtca
aaatgcatttctcacgatgaaaaattacgaaaattttgttcaaagtgcgaaacacctgta
tgttctgaatgcgaacattccgaccacaaaaaacatacatttatacctctagaagatgtt
gttgaagaggtacgagacaatttgtctaatgcacttgaaatgtacaaagttttagaagaa
tgtgatggcgaatccgatatgcagatggctaagagatttcaggaggtgacaaacaaagag
aaaactcttctgcagattgtccacagtgctcgtgaacgtctgattcaagaaatacaacag
caagcaactgctgcagaattggccatatctcagccatttgaggctgtgaaaatgctctta
tcagaatcgatggaattagaaaagaaacgttccgaaagcacacagaaatcgcgactgttc
tgtgaaaagcttcaacaagagggccttaaaggagagtgcgtccattttagagatttgctg
cagagagtaaaaaagggcgaccgtaaaagagcccaacttgaatttccgcccatgcctgaa
ataaacgtcaacgttaacgagttgtcttttcccacaattttcagtgtgtcggtgtctgag
cagagacctgttagtcaattggagattccaagagttaaaagcgctgttgtcatgacagga
tcagtgaatgaaaggctccaggaaaatctctacacacgacaaaggggaaataacgctgaa
cgcatcccaacaccagaggccaggggtgacaaacccaaaacagacttcccagagagtggt
gctgctggaacagatcaccaatcgcatccacaagaggttgaatttaaaggatgcgaggag
gttgaggattctgatgttgaagaaactgaggatgacgatgatgcagacaacaatgcaaac
cgtcgcccatttaatgtgccagttgtgcctagaaaaagtgaaaaaactgttgatgacgag
ggcattattgcaacattgaatgtcaatgattttcaaattatttcattatctacgatacat
gataaaaattcacccgaaattttcgatatagcatggctgacagacacagagttcgccgtc
ggtgacaaggctaatcaaacaatcaaagtcttccaagatggaggagagtttctctggcag
aagtacatacaagaaggtttgatcgatagaatagcttgtgttgatggtgttgttgcttca
gactttccatctggtgtacacttggatatgagaaacgaatcttttaccaagatttattac
caaagtaccacgaatcgaacaaacccttacccgatagcgaagaccatcgggaaagaagtg
attataggaaacgccgattttcctgaacttagatgttatactacaaaagggaagagaatc
cgatacctgccattaggaaagaaattgaaaattaattatattgctctaaatgaaaacaaa
gcattcttttttactgaaaaaaattccactattgtgaagaaattccaggagggacaaggt
ataagtaaattctttgacgggctacccggctgggttccggaaggcgtggccactgactct
gagaacaacgtgtatgtatctgacagcgcgggcagcgacatcgtcaaactgtccccccag
gggaaactgctcggtatcctggaggtccacccgaccagtcctcgaggcatgtcgatttcc
cgccaaaatcagttactggtctgtgatggagaagggagagcgtggctggtgcacatctga
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