Magallana gigas (Pacific oyster): 105325139
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Entry
105325139 CDS
T03920
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105325139
Enzymes [BR:
crg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105325139
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105325139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_Vps41
APG6_N
FANCL_C
zf_RING_Vps8
SPAM
zf-UDP
SOGA
zf_RING_Vps8_fungal
zf-RING_16
HALZ
DUF7310
Motif
Other DBs
NCBI-GeneID:
105325139
NCBI-ProteinID:
XP_011422850
LinkDB
All DBs
Position
3:complement(39975480..39979734)
Genome browser
AA seq
458 aa
AA seq
DB search
MKAQCCICAEHFVNDASVAIAAVQCGHTFHEGCLSTWLKTSYTCPSCRTRVDPSRVINRL
FFDGDENENDDSDVGRLKNSIQNLQAEKRTAELKLKELESDNESLNRKLKSVKKEKDVAE
TKFIQEQSNISSLKKQLQFFQVQQKAIEKERETCSKIKQKFSQYQNIERLLTACEVDIKE
TIQQYGEASKESVQNLATYCSMLKREYDKIKSEKKAVKSEFERFKRENMSKDHILREKGK
EISVLKEQLTHSEEDLKKVEKEKHLLKRKILNYRKAVQSPNGENVASVSFVDKMMSESPL
NDIKNNANTPVLFDESMDKMKEVDLEEYSKKSVSPEILKSSSTQSSQNKRLQNSETEVKY
LKIGTASQNPNKRQKCEDRTEIQGLSHFNIFKKKSGVGDYSSCIRKGFNGLGCVETFTES
SGRPKLSVPKRSISRVSKNGKMLKVPALPTLDNFVTLD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctcagtgttgcatctgtgctgagcattttgtgaatgatgcttcagtagcaata
gcagctgtacaatgtggacacacttttcatgaaggatgtctctcaacatggctcaagacg
tcctacacctgtccaagctgccgcactcgtgtggatccttcccgggttataaatcgccta
ttctttgatggtgatgagaatgaaaatgatgattctgatgtaggacgtttaaaaaatagc
attcaaaatctacaagctgaaaaacgaactgctgagctcaaattgaaagaactagaaagt
gacaatgaatctttaaatagaaaactgaagagtgtgaaaaaagaaaaagatgttgcagag
acaaagtttatacaggagcagtcaaatatttcaagcctgaagaaacagctgcagtttttt
caagttcagcaaaaagctattgaaaaagagagggaaacttgttcaaaaattaaacaaaag
ttttcacaataccagaatattgaaaggttattaacagcatgtgaagttgatatcaaagag
accatccagcagtatggagaagcaagtaaagaaagtgttcaaaacctagccacttattgt
agcatgttaaaacgggaatatgacaaaatcaaatcagaaaagaaagctgtgaagtctgaa
tttgaaaggtttaaaagagaaaatatgtccaaggatcacatactaagggagaaaggaaag
gagatatctgtcctaaaggagcagcttactcattctgaggaggatctgaagaaagttgaa
aaggagaaacatttattgaagaggaagattctcaattatcgaaaggctgttcaaagtccc
aatggagaaaatgtggccagtgttagctttgtggataaaatgatgagtgagagtcctttg
aatgacatcaagaataatgccaacactcctgtcttattcgatgagtcaatggacaaaatg
aaagaggtggacctggaggaatattccaaaaaatcagtgtctccagaaatcttgaaatca
tcaagcacccagtcttcccagaacaagcggctgcaaaactcagaaactgaagtcaaatac
ttaaagattggaacagccagtcagaatcccaacaaaagacagaaatgtgaagatcgaaca
gagatacaaggactcagtcatttcaacatattcaagaaaaagtctggtgtaggggactat
agttcttgtatcaggaaaggtttcaatggattaggttgtgtggagactttcacagaatcc
tcgggcaggcctaagctctctgttcctaagcgatcgattagccgagtcagtaagaacggc
aaaatgctgaaagtaccagctctgcctacgcttgataattttgtaacactagactaa
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