Magallana gigas (Pacific oyster): 105325291
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Entry
105325291 CDS
T03920
Name
(RefSeq) nuclear pore glycoprotein p62 isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105325291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105325291
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105325291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF726
Exonuc_VII_L
DUF3074
ARCH_RTEL1
DUF7201
Motif
Other DBs
NCBI-GeneID:
105325291
NCBI-ProteinID:
XP_034301286
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All DBs
Position
2:complement(44503660..44515389)
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AA seq
473 aa
AA seq
DB search
MFGGNSGGSGFTFGTQTPSTQGAPASSSTSTPLGGGFSFGQKPAAPGTSAPPFSLGGQPQ
SSTPAQGGFSFGSSATPASATPGGFSFGQNPGSVPQATPSTQPNAPASTGTQLGGLAGFA
MGKMPTASIGTPAAAPVGASAAPTGTTGLTLGATLGTAGAGFSLTGQPAAATKPVGISLG
TTQATSTAGPTLGTLGTAASTTITGNPLGTASSGGGITFGTQKTTAAPTLGSLIGGATTA
ASTTQSTLGFPTPVAATSSAAVSSAAGVSVAAASAGSKMSYQQLEENINKWMSELEKQEQ
DFLELATQVNAWDRLLVENGEKITTLNSDMERVKVDQQKLDYELDFIHSQQRELEELLAP
LEKAVEQQPNINIQQHSALERENTYQLAENIDAQLKRMLSDLKEIIDHLNSSNTNQDQTD
PIQQITKILNSHMDSLQWIDQNSTLLGRKVDEISKQMEVQKREQERNFRLVYN
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgttcggaggaaattcggggggaagtggatttacatttggaacccaaacaccatcaacg
caaggagctcctgctagttccagtacctctacaccgctaggaggcgggttttcatttgga
caaaagccggctgctcctggaacatcagcacctcccttctctttggggggacagccccag
tcctctacccctgcccaagggggattttcctttggatcatctgccactccagcatcggcc
acacccggtgggttttcttttggacaaaaccctggaagtgtcccccaggccacaccctct
acccagccaaatgcccccgcttccactggcacacagttagggggactggcaggatttgcc
atgggtaaaatgccaacagcctccataggaaccccagcagcagcacctgtaggagcctca
gctgccccgacaggaactacaggtctgactttaggggccactcttggcacagcaggggca
ggtttcagcttaactggacagcctgcagctgctactaagccagtgggaatttccctgggt
accacccaggccaccagtacagcgggccccactctcgggactctgggaactgctgcctcc
acaacaatcacaggaaatcccctggggacagcctccagtggtggtgggattacctttggc
acacagaaaacaacagcggcgccgaccctgggctcactgattggtggtgctactacagct
gctagcacaacacagagcacccttggctttccaacaccagttgctgctacaagttcggcg
gcagtaagctctgcagcgggagtatcggtggcagcagccagtgcaggctccaagatgtcg
taccaacagctagaggagaacatcaacaagtggatgtcggagctggagaaacaggagcag
gactttctggagctcgctacccaggtcaacgcctgggatcgcctccttgtggagaacgga
gaaaagatcacaacactaaacagtgacatggagcgtgttaaggtagatcagcagaagctt
gactatgagttggacttcattcactcccagcagagagagctggaggaactcctggcccca
ctggagaaagctgtggagcagcagccgaacatcaacattcagcagcattccgcactggag
agggaaaacacatatcagttagccgagaatattgatgctcagctgaagagaatgttgtca
gatttgaaggaaattatcgaccacttgaattcatcaaatacaaaccaagaccaaacagac
ccaattcagcaaattacaaagattctcaactctcacatggattccctgcaatggattgat
cagaattcaactcttcttgggaggaaagttgatgaaatttcaaaacagatggaggttcaa
aagagagaacaggaaaggaatttcagacttgtgtacaactga
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