Magallana gigas (Pacific oyster): 105325443
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Entry
105325443 CDS
T03920
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crg03400
]
105325443
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
105325443
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Gene cluster
GFIT
Motif
Pfam:
UBA_4
Exo_endo_phos
UBA_8
Exo_endo_phos2
TAP_C
Motif
Other DBs
NCBI-GeneID:
105325443
NCBI-ProteinID:
XP_011423305
UniProt:
K1R9L0
LinkDB
All DBs
Position
5:16870803..16874043
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AA seq
346 aa
AA seq
DB search
MSEDNEDENLPSAAECEKRCQCFADITGTDTALAMFYLQDRNWNVEIAVNAFFEESNQDA
TAQNQGTKRGLSESANPEASSKQIKLADDDPEPHRIRLLSWNIDGLDMPSAEKRTKEICN
IIKKENPQAVLLQEVTPVTLPILQQNCTGYRVISGGSTEYFTAIMLKDGQVVFKGKEIQP
FENTVMMRNLLSVQCQIKGKPFTVMTSHLESTKDFGDQRKRQLKQCFEAVKAEPASQNVI
FGGDLNLRDKELSAIGGIPGGMCDVWEATGSRKECLYTWDMMRNTNLVFDKFKPRCRFDR
LYLRHSNPGTIKPVYFELIGLEKVKSCGRFPSDHWGLLTHYDIIKI
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggataacgaagatgaaaacttgccaagtgctgctgagtgtgaaaaaagatgt
cagtgttttgcagacatcacggggactgacacggctcttgcgatgttttatttacaggac
agaaactggaatgtcgagattgccgtaaatgcattctttgaagagtcaaaccaagatgcc
acagctcagaaccaagggacaaaaagagggctatcagagtctgccaacccagaagcatca
tccaagcaaattaaattggcagatgatgatccagaacctcacaggattcgactactcagc
tggaacattgacgggctggacatgccaagtgccgagaagaggaccaaggaaatctgtaat
atcatcaaaaaagaaaacccacaggcagtgttacttcaagaggtgaccccggtgaccttg
cctatcctccagcagaattgtactggatacagggtgatttcaggcgggtccactgagtat
ttcacagcaatcatgttaaaagatgggcaggtcgtgtttaaagggaaggaaatacagcca
tttgagaatacagtgatgatgagaaacttgctgagtgttcagtgtcaaataaagggaaag
ccatttacagtgatgacctcacatctggagagcaccaaggactttggagatcagaggaag
aggcagcttaagcaatgttttgaagcagtcaaggcagaacctgccagtcaaaatgtgatc
tttggtggggacctaaatttgagggacaaggagctctctgccataggaggaataccaggg
ggcatgtgtgatgtttgggaggccacaggatccagaaaggagtgtttatatacctgggac
atgatgagaaataccaacttagtgtttgacaaattcaagcctcggtgccgctttgatcga
ctttatctgagacattcaaatccaggcaccatcaaaccagtgtactttgagctgattgga
ttagagaaagtcaagtcttgcggaagatttccaagtgatcactggggactgttgactcat
tatgacatcattaaaatctaa
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