Magallana gigas (Pacific oyster): 105325470
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Entry
105325470 CDS
T03920
Name
(RefSeq) iroquois-class homeodomain protein irx-2
KO
K24889
iroquois-class homeodomain protein IRX
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105325470
Transcription factors [BR:
crg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
105325470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
105325470
NCBI-ProteinID:
XP_011423351
UniProt:
K1QIR0
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Position
3:complement(11241857..11244758)
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AA seq
505 aa
AA seq
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MSMGSNRTDHMVCNDPLCTTTSDPYSGRITCRCFQTQMHDSRGGYQPNGQFPTIPTTSYP
THNMYTNGYPMDPLSNPSSMLSSQTMRMDSGSYPSIPSSALTSRSLHTSSSLLPSGLPPS
STLTSSGITSNSLTSQFQAPLSPSLVTASSVNNLDTVLRSQVYNYMNMQYSGFDMNGGRR
KNATRETTAPLKAWLKEHMKNPYPTKAEKVMLAIVTKMTLTQISTWFANARRRLKKENKG
EWNSDNSNNSSDEDNTNDEIPAKTADDRLSAEPIPPQSEEIADENSNSATKLIEPAFSIP
PMNGEHDHMGPLHPDPVSGFDSSTPLKMPLPSFSTFMCGGASNQPEPTVHHYANGSQQMP
PTSSLPPYNNVYHHQQHQSAYPQPQSNFQPGYPNSSNYSSSSYQYDSVANYFKNHPNFAH
EYNTVADKENLQVLDAHNMLSTDFLADASVGKHSDSESCGQKSSDSSPSSVKSKIWSISE
IIGSSMSKINESDLGAFAQSLLEEK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgggaagtaaccgtacagatcatatggtctgcaatgatccattatgcacaacg
acctctgacccgtactcggggagaatcacgtgcaggtgtttccaaactcagatgcatgat
tccagaggagggtaccagcctaacggacagttccccaccatccccaccacctcctacccc
acccacaacatgtacacaaacggctaccccatggacccgttatctaacccttcatcgatg
ctgagctcacaaacaatgcggatggacagcggatcatatccttctattccatccagcgct
ctgacgagcagatccctgcacacatcctcctctcttctcccgagcggcctgcctccttcc
agcacgttaacctcaagtggaatcacatcaaacagtttgacgtcacaatttcaagcgccc
ctctcacctagtctggtcaccgcatccagtgtgaataatttagataccgtattgcgctcc
caagtatacaactatatgaatatgcaatattcaggctttgacatgaatggagggagacgt
aaaaacgcaacacgagaaacgaccgccccactgaaagcatggctcaaagagcacatgaaa
aacccctaccctacaaaggcggaaaaggtgatgctcgctattgtgacaaaaatgactctc
acacagatttcaacgtggtttgcaaatgctaggaggagattgaagaaagaaaacaagggt
gaatggaattcagacaattcaaataactctagtgatgaggataacacaaatgatgaaatt
cccgccaaaaccgcggatgatcgtctgtcagccgagccaattcctccacagtcggaagaa
atcgctgatgagaattccaattctgcaacaaaactcattgaacctgcattttcaatccca
ccaatgaatggcgaacatgaccacatggggccattacatcctgatccagtctccggtttc
gattccagcacacctttaaagatgcctctaccttccttttcaaccttcatgtgcggaggt
gcttcaaatcagccagagcccacagttcaccattacgcaaacggaagtcaacagatgcca
cctaccagttcacttccaccatacaataacgtttaccatcaccagcagcatcagtcagct
tacccacagcctcagtctaacttccagcccggatatcctaattcatcgaattattcgtcc
tcttcctatcagtatgactcagtagctaattactttaagaaccatccaaacttcgcgcat
gaatacaacacagtcgcggataaagaaaacctccaagtgctggacgctcacaatatgcta
agcaccgacttcctggcagatgcttccgttggaaaacatagtgacagtgaatcttgtggt
cagaaaagctcggacagtagtccgtcttctgtcaaatctaaaatctggtcaatttccgaa
atcattgggtcaagcatgtctaaaattaacgagagtgacttgggtgcttttgcacaatct
cttctggaggagaaatga
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