Magallana gigas (Pacific oyster): 105325481
Help
Entry
105325481 CDS
T03920
Name
(RefSeq) longitudinals lacking protein, isoforms H/M/V
KO
K10457
kelch-like protein 20
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105325481
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
105325481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-Tnp_2
Glyco_transf_99
Motif
Other DBs
NCBI-GeneID:
105325481
NCBI-ProteinID:
XP_011423362
LinkDB
All DBs
Position
5:39353989..39360809
Genome browser
AA seq
618 aa
AA seq
DB search
MSYQKFYTNPIQSSSLLCQLASMWKNDIMCDAVIKTGNVNTKAHRVVMMAACPMLQSMDH
AASGSKLEIRLSPDIKQQSIQSFLQYLYEGFMMVTEDNYKDIEKIGRLLQVDSVIKCCAD
FCKSLAVGRRSLSNADQYRYTFCDMIEFRHVRSSDLQRTISENQVKRSHDVHGHCLDNGV
KRTRHSSSPIKSSNRNLPNQADNVLDGKILQDSLEFVQVEPADSGGSHQSVRVGVVSHCE
NNPETSVVIPTGDCCDTPCGSTVVSESSRSPKCTNTLSRNQTPSSSDTSGQRQSPHQSSE
SMDEISKEFKQNRPNETAPDLAKSCDPKESTEAQGNRLQNDSQLGPDLSIVKVESIAPDP
DRHRILEQEQVAADYKDNSSQHRSRPSESMELDQLGSAVRSSDGSTHKILDSMTELNEHI
RYHTGNLMRMLPENQQSNQHHPGESVSSADPRGHPHKMNQQGKQQTRVHTVSSPPYPFSV
SSTMHHLPPVSALSHFMLPPRTHLQVAAKPPPTGLIDLSEDSSGETRRSGDSQPSAIHKL
MYIPNRKPCTWCQIKGVKTKSGWYCYASYKCEVCDVPLCKQGRVCFQEYHRHIGIPDSEI
VNPNNDSGSFLFDFSPNK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccagaagttttacaccaatcctattcagtccagttctctgctgtgtcagctg
gcatcgatgtggaagaatgacattatgtgtgatgctgtcattaagacagggaatgttaat
acaaaggctcatagagttgttatgatggcagcttgtcctatgctgcaatctatggatcat
gctgcatcaggatccaaattagagattcggctttcaccagatataaaacagcagtcaatc
caatcattcttgcagtatttgtatgagggcttcatgatggtgacagaggacaactacaag
gacattgagaagattgggcgtttgttgcaagtagacagtgtcattaaatgttgtgctgat
ttctgcaagagtttagcagttggaagaagatccttgtccaacgctgaccagtaccgctac
acattctgcgatatgatcgagtttcggcatgttcgatcctcagatctacagaggaccatc
tcagaaaatcaagtcaaaaggtcacatgatgtgcatggtcattgccttgataatggtgtc
aaaagaactagacatagcagtagtccaataaaatcaagtaataggaatttgcctaatcag
gcagacaatgtgctagatggaaagattctacaggacagtttggagtttgtacaagtagag
cctgctgactctggggggtctcatcaaagtgtgagggtgggggttgttagtcattgtgaa
aataatccagagactagcgtggtgatacctacaggagattgttgtgacactccttgcgga
tccacagtggtgtctgaatcatctcggtcaccaaaatgtacaaatactttgtcaagaaac
cagactccatcttcatctgatacctcaggtcaaagacaatcaccacaccaaagttctgaa
agtatggatgagatttcaaaggagtttaagcaaaacagaccaaatgaaactgctccagat
ctagctaaatcttgtgatcccaaagaatcaactgaagctcagggaaacagacttcaaaat
gacagtcagcttggtccagatttgagcattgtcaaagtagaatccatcgccccagaccct
gatagacacaggattttggagcaagagcaggttgccgctgattacaaagacaacagctcc
caacacaggtcaaggccatctgaaagtatggaacttgatcagcttggttcagcagtaagg
tccagtgatggaagtactcataaaatccttgacagtatgactgaactgaatgagcatata
agatatcacactggtaatttaatgcgtatgttgcctgaaaatcagcaatcaaaccagcac
cacccaggggagtcagtgtcctcagcagatccgagaggccatcctcataaaatgaatcag
caaggtaaacagcagaccagagttcatacagtttcctccccaccttacccattttctgtg
agctcaacaatgcaccacctacctccagtgtctgccttatcccacttcatgctgcctcca
cgcacccatctccaagttgctgccaaacccccacccacgggactcatcgatctgtccgag
gattcctcgggggagacccgtagatcaggggacagccagccctctgcgatacacaagttg
atgtacattcctaacaggaagccttgcacctggtgccaaattaaaggtgtgaagacaaag
tcgggctggtactgctatgccagctataagtgcgaggtgtgtgatgtccccctgtgtaag
cagggcagggtttgttttcaggagtaccatagacatatcgggatacctgactcagagatt
gtgaatccaaataacgatagtggatcttttttgttcgatttcagtcccaacaaatag
DBGET
integrated database retrieval system
