Magallana gigas (Pacific oyster): 105325526
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Entry
105325526 CDS
T03920
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105325526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105325526
Enzymes [BR:
crg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105325526
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
HECT type E3
105325526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
105325526
NCBI-ProteinID:
XP_034302935
LinkDB
All DBs
Position
5:52678712..52704148
Genome browser
AA seq
2977 aa
AA seq
DB search
MTSIHCVVHPLPGSDTQLNDRIREVAERISHHGFNSPPAFSALTNVTVTQCAVGPNYMAF
LLEDGRVCRLSYGIAVDKLDLNKSDGKSKPVSRPERSERTSGIPSRSSSLVVESPMVLVS
DVLGSSADPPTGRWGSTTTTITGSTTTRSQPAYSRMQRTVHVSRGRRSGVIVGSRPLVPA
SVVPEDLISQCQVVLQGKSRNLIIRELQRTNLDVNQAVNNLLSRDDEGEVEDDDSQDSYM
PDDLISLLDGGMHSEHPSVIIDADTMYNEDVFGYSTLRSRASSTRPRLGDRDRDLDRESR
ESIFRIRDRRRLDTTLRDETLKSLERDKADSLLEGENLKKQALPTQTPVNFGDDVHFLME
KDGTHSTFTHIAAMHSDLVAVGTDGQLYSWKWNEAEPYKQHDNPSIRHPKVIPLGLQNER
IMGLSACGVRASVFTESNKVATWVDDTLNSVASKLEHPAQTFPEFQTDKIVSLHTCSLYT
CARLESSALYWWGIMPFGQRKKMLEKTKKKKSKDGSVCSDMAAGSLVCLRSSPMYHSGAL
AFATVDGVPKVGQLLESAWSLSDTCRFKILKQTPLEPKPEVKIEVKSCDVKPDMPPPPSP
DSSTCSDHSGPTLISTSLKRKKAPTPLKDFEKKDEENWPLKNVIFVEDVKTVPMGKVVKV
DGAYAVVKFQSRDALDSGLGREDPVSMLQDCRILRKDELQVLKSANAPRLPDCFQKTPKK
VTLTESGQILAVAVDCEGIHLIARSGSRLSYTIYNLTTGKVEQDATFPTDAQTFLGENRS
DITLHNTGDELLVQLQDGNGALYPLAKDCAEGIRDPLWLNLPPVRALGIRVQCLNPVGNN
LKNKACVLVLAVEHQSLIPHILRCDVEKVKSILLSLEQEQDSAAGQKMQQDITKEHCDGN
RNILHTCVAMCAPTSNKDYDQEPVPLSTAAAPGNATTSSSSFSSALEAINAVSSAVDALN
AIQSRTSDPSSRCVSLREMMKRASSAARAVSGIDVRESEDMSIPTLQWPPDPPPSYDTLQ
QEHNISRQSSSSGLGAPLVSGEFSTVSIPPVKLEEKERRVNAMAILRLLCDCPQLQRHLV
ELLSARNADGCTVFMQAVRSCSYAAALVVLDTAKRVATNESGWLDRATFMQMLYPTGSSL
DNSPLQMLCCNDTCSFTWTGREHIKQDIFECKTCGLVGSLCCCTECARVCHRGHDCKMKR
TSPTAYCDCWEKCKCKALIAGQQQPRFELLNRLLTETDLVKLPNSRGENILLFLVQTVGR
QLIEQRQYRPNRSRVPTSRKAIPQDPDAEMPEHDLEPPRFSRRSLERILNDWTAVKSMIR
SGMKGTVSPDVVYEDQLYLDSQSGTARLDKFTHTLLVKCSVEMLDTLLTTLIREMQNDNV
EGRKAEARTVTRRFIRSVARIFVVLNIEMTPATNKKKSSSITACQPLVRCKRAFNALITI
AIEELCEIADSLIAPVRMGVLRPTAPFTLATANIDAIQGSEEIFNIDPLPPRSHPADSEN
HSVSYISHPRISQSEASQRGGQDREDDEMMQQEEEAAEGMGGDDDQSDHEDRDDHQSEHS
DQDQVDNEGGAAESDMDLDLLAESESDSESSHSNQDNVSVQRSAVTAATAGSDAGLGSLA
HFSEDSGESSNQEEDYESEGEQSNEGNDADDINYIDEQLERCHTSGSHGQRTLQAPQTMQ
WAIRQRETPAARPPPASGTTTTTGGTGGLIYIDPATMRRTNTVTTATVHHHQENQVTMTT
TASQLARAFSVVVRQVADLLTMIQDYNALAPGLPRVLEISDQEASDLQCYTEMHLSLTWD
WLIDIMDSTEAQLRFGAALCHTTDPANPNHPFHSNYVRNLRERTNREESRILQALDRRRA
RFGAIGTDGNLARREFLNYALSLMRSHNDEHADSLPSLDISSMRHVAYVFDSLIYYMRSG
IDTDADVFRDGISVISWDHDENENDEHDEDPVTNMSMDNESVDGESDVTTKSGRKHPFFH
RSDSTTFLGCPPPDPFQTPLVQALPLADQPHLLQPNARREDLFGMIRQTVIPFRSSSDMK
SAQKMSGSRNQFDKLPIRMALSERRPGSCLIQPGTLPMATVPAPLNQPGPSHLPDVAFSS
ASVIVKPPSQTLSTQMAASQQSVDTNLVSSIPLPGQSAEPFKSHEMLNQASVIVHSSGAQ
GLQVPGPAYSGSPLPDPRYVPGDRRADQVSQANTQSSSQDRSLDTQSPSMGSLPTDSSGT
SLMSGVTTQCSTGGTSSLAKSSTESSGVSMDALQGAMMESRSLQSLSSESMSDSAPFPDQ
TPGPSTMEMADQRPQSSSDGPSMQASYNDSLPPSSVDNGLDLVGAHENVCNTVDIETSAV
PPGLGPVRMNPLSNLVSHDVLLGRWRLALDLFGRVFCDDVGSEPGSVISELGGFPVKESK
FRREMEKIRNSQQRDIILDVERDRNLLIVQSFKQLNTQYNRRTNTSGPPLAVHRVKVTFK
DEPGEGSGVARSFYTAIANAVLSQEKLPSLDGVLIGGKNLQYNLLQRARSRERERERQRT
SLRRQRSRERDTRRNLSYDAPPFYMPADAPTSNNNPSSAGPPSSDSSSDGAPDTVSQYRR
QLGERLYPKVRALQPSLAPKITGMLLELSPAQLLLMLTSEETLRQRVDEAVDIIMSHGRE
LSAEALLDLDIFNLSANDKKKKSTERKAEVEEEEELEDNSPLFWQPGKRGFYSPRPGKSA
PERLNAFRNVGRIIGLCLLQNEMCPLFLNRHVLKYILGRKIGWHDLAFFDPVMYESLRQL
VLDSEHKDASVLFAALDMNFFVQLGAEEGGEEVELIPGGNDIEVNAQNVHDYVRRYAEFR
MTKVLDKALKHIKLGVFDVIPSNSLEGLTAEDLRLLLNGVGDINVQTLISYTSFNDESGE
NNDKVQRFKRWFWSVVEKMNNQERQDMVYFWTSSPALPASEEGFQPMPSITIRPADDDHL
PTANTCISRLYIPLYSSKVVLRSKIILAIKTKAFGFV
NT seq
8934 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatacattgtgtggtccatccactccctggaagcgatacacagctcaacgat
aggattagagaagtagccgagaggatcagccatcatggctttaatagtccacctgccttc
agcgccctcacaaacgtgacagtcacacaatgcgcagtggggcccaactacatggctttc
ttgttggaggatgggcgagtctgtagactctcgtatggtattgctgttgacaaactagat
ttgaacaagtctgatggaaaatctaagcctgtgagccggccggagcgcagtgaaaggact
tcgggaatccccagcaggagtagctctttggtggtagagagtccaatggtcctggtctct
gatgtgctggggtctagtgcagatcctcccacaggacgttggggaagcaccaccaccaca
ataacagggtccaccaccacccgcagtcaaccggcctacagccgcatgcagaggactgtt
catgtcagccgaggtcgaaggtcaggggtcattgtggggagtagaccccttgtgcctgca
tctgttgtaccagaggatctgataagtcagtgtcaagtggtcctgcaaggaaagtctcgc
aatttgatcattagagaattacaaagaactaacttggatgtgaaccaggcagtgaacaat
ctcttgagtcgtgatgatgagggtgaggtggaggatgatgacagtcaggattcgtacatg
cctgacgacctgatttcgctcctggacggtgggatgcactcggagcaccccagcgtcatc
attgacgcagacaccatgtacaatgaggacgtgtttgggtactccacactcagaagtagg
gcgtccagcacccgtcccaggctaggtgacagggaccgtgacttagacagagagagcagg
gagtcgatattccgcatcagagatcgtagacgcctggacaccacactgagagacgaaacg
ctgaagtcactggagcgtgacaaggccgattccttgttggaaggagagaacctgaaaaaa
caggcacttcccacacagactccagtcaactttggggacgacgtgcatttcctgatggag
aaggatggaacccactcgaccttcacccatattgctgctatgcactctgacctggttgct
gtgggaacagatggacagttgtacagctggaaatggaatgaggcagaaccatacaaacag
catgataatcccagtattcgtcatccaaaggtgattccactcggtctacagaacgagagg
atcatgggattgtctgcctgtggggtgagagcctccgtcttcactgagtccaacaaagtg
gccacctgggtggatgacaccctgaacagtgtggcctccaaactagaacacccagctcag
accttcccagagttccaaacggacaagatcgtctctctccacacatgctcactgtacacc
tgtgccaggctggagagtagcgccctctactggtggggaatcatgccgttcggacagagg
aaaaaaatgttagagaaaaccaagaaaaagaagagtaaagatggatctgtttgcagtgat
atggctgctggctcgctggtttgcctgaggagttcacccatgtaccacagtggagccctg
gcctttgccacggtcgatggtgtcccaaaagtaggtcagctgctggagagtgcctggtca
ctgtctgatacgtgtcgcttcaaaatcctcaaacagacccctctagaacccaaacctgag
gtgaagattgaggtgaaatcctgtgatgtgaagccagacatgcccccacccccctctcca
gactcgtcaacttgtagtgaccatagcggccccacgctcatcagtacatcactcaagcgc
aaaaaggcaccaactccattaaaggactttgagaaaaaggatgaggaaaactggccactg
aaaaatgttatatttgtggaggatgtcaaaactgtgcccatgggcaaagttgtaaaggta
gacggagcttacgctgtggtcaagttccagtcccgggatgccctggattcgggacttggg
agggaggacccagtcagcatgctacaggactgtcggatactcaggaaggacgagctacag
gtgttgaagagtgccaatgccccccgcttgcctgactgtttccagaagactccaaagaag
gtgaccctgacagagagtggtcagatactggcagtagctgttgattgtgaaggtatacac
ctgatagccagatctggatcacggctgagctacaccatctacaatttgacgacggggaag
gtggaacaggatgccacatttccgacagatgcccagacatttcttggtgaaaaccgtagc
gacattactttacacaacacaggagatgagctgctggtccagttacaggatgggaatggg
gccctgtaccccctggccaaggactgtgcagagggcatacgtgaccctctgtggttaaac
ttgcccccggtccgtgcgcttggaatccgggtccagtgtctgaaccctgtgggtaacaac
ctgaagaacaaggcctgtgtactagtgctggccgtagagcaccagtccctgataccacac
attctgcgctgtgacgtagagaaggtcaagtccattctgttgtctctggaacaggagcaa
gactctgctgctggtcagaagatgcagcaggacattacaaaggagcactgtgatgggaac
aggaacatcctccacacgtgtgtggcaatgtgtgcccccacctcaaacaaagactatgac
caggagcctgtcccactgtccacggctgctgcccctgggaacgccaccaccagcagtagt
tcctttagctccgccctggaggccattaatgctgtcagcagtgctgtggacgcgctcaac
gccatccagtcacgcaccagcgaccccagctctagatgtgtgagcctgagggaaatgatg
aagcgagcttcgtcagctgctcgagctgtcagtggtattgatgtgagagagtcagaagac
atgtccatacccaccctacagtggccccctgatcccccaccaagctatgacaccctgcag
caagagcacaacatttcgcgccagtcatcatccagtggtttgggtgcgcccctggtgtct
ggggagttcagcacggtgtccatcccgccagtcaaactggaggagaaggagagacgtgtc
aatgccatggccattctccgcctcctgtgtgactgtccacagctacagcgccacttggtg
gaactgctctcagcaaggaatgcagatggttgcacggtgttcatgcaggcggtgcgcagc
tgttcctatgcagcagcattagtggtgttggacactgctaagagggtagccacaaatgag
tcgggctggctggaccgtgccacatttatgcagatgctgtaccccacaggctctagtttg
gacaactcccccctacagatgttatgttgtaacgacacctgtagttttacctggacggga
agggaacacatcaaacaggatatctttgagtgtaagacatgtggactggtggggtccctg
tgttgttgtaccgagtgtgcccgcgtttgtcacaggggacacgactgcaaaatgaagcgg
acctctccgacagcttactgtgactgctgggagaaatgtaaatgtaaggcgctgattgcc
ggccaacaacagcctcgctttgagttattgaaccgactgttgacagagacagacctggtc
aagctgcccaacagcaggggagagaacattctgctgttcctggtacagaccgtgggtaga
cagctaattgaacagaggcagtaccgcccaaaccgatcacgggtccccacctccagaaag
gctatcccccaggatccagatgctgagatgccagagcatgaccttgaacctccacgattc
agtcggcgctcgctggagcgtatcctaaatgattggacagcagtcaagtccatgatcagg
agcgggatgaagggaaccgtttcaccagacgtagtatacgaggaccagctatacctggac
agtcagagtgggacagccagactggacaagttcacccacaccttgctggtcaagtgcagc
gtagagatgctggataccttgttgaccacattaatcagagaaatgcagaacgacaacgtc
gagggaaggaaggcggaggccaggaccgtgactcgcaggtttatcaggtccgtggccagg
atctttgttgttctgaacatcgagatgacaccagcaacaaacaaaaagaaaagttccagc
atcacagcctgccagcccctggtaagatgtaagcgagcattcaatgcgctgatcactatt
gctatcgaggagctgtgtgagattgccgattctctgattgccccggtcaggatgggggtt
cttcgccccactgccccattcaccctggccactgctaacattgacgccattcagggaagc
gaggagatttttaacattgatcccctgccccccaggtcccaccctgctgactcagaaaac
cactcggtgtcctatatctcccacccccgcatctcccagagtgaggcctcccagaggggc
ggtcaggatcgggaggacgatgagatgatgcagcaggaggaggaggctgcagaaggaatg
ggtggtgacgatgaccagtcggatcacgaggatcgagatgaccaccaatcggaacactcc
gaccaggaccaggtggacaatgaaggaggtgctgctgagagtgacatggaccttgatcta
ctggccgagtcagagagtgacagtgagagtagtcatagcaaccaagacaacgtcagcgtg
cagcggagtgctgttactgcggcaacagcaggatctgatgcaggactgggaagtttggcc
cacttttctgaggattccggagaatcgtccaatcaggaagaagattacgaaagtgagggt
gagcagagtaatgaaggaaatgatgcagacgatataaattacatcgatgaacagctggag
agatgtcatacttcaggttcacatggacagaggacactacaggctccccagaccatgcaa
tgggccatcagacagagggagacccccgccgcccgacccccacctgcctcgggaaccact
accaccacagggggaactggtggtctgatttatattgaccctgctacaatgaggagaacc
aacacagttaccacggcaacagtccaccatcaccaggagaatcaggtcacaatgacgacc
acggccagtcagctggcacgggccttcagtgtggtggtcaggcaggtggcggacctgttg
actatgatacaggactacaacgccctggctcccggcctgcccagagtcctggagatttct
gaccaggaagcaagtgatttacagtgttacacagagatgcacctctctctgacctgggac
tggttgattgacatcatggactccacagaggcacagttaaggtttggtgctgccctctgt
cacacaacagacccagccaatccaaatcatccgttccactccaattatgtccggaacctt
agggagcgtaccaaccgtgaggaaagccggattctgcaggctcttgacaggcgcagagcc
cggtttggtgctattggaactgatggtaacctagctcgtcgagaattcctgaattacgcc
ctgtccctgatgagatctcacaacgacgagcacgctgactcacttccaagtctggatatc
tcgtccatgagacatgtggcctatgtgtttgattccttgatttattacatgaggagtggt
attgacacagatgccgatgtcttcagagatggaatatctgtcatctcttgggatcatgat
gaaaatgagaatgatgaacatgatgaggacccagttacaaatatgtccatggacaatgag
agtgtggatggagaatcggatgtcaccaccaaatctggcaggaaacatccattcttccat
cgatctgactccacaaccttccttggctgtcctccaccagatccatttcaaactccattg
gtacaggctcttccattggctgatcagccacatctcctccaaccaaatgccaggagagaa
gatctgtttggaatgattcgtcagactgtgataccttttaggtcatcatccgatatgaag
tctgctcaaaagatgtctggcagcagaaaccagtttgacaagcttccaatcagaatggct
ctctctgagcgtcgcccgggcagctgcttgattcagccagggacgttacccatggcaaca
gttcctgccccactgaatcagcccggaccttctcatcttccggatgtagctttcagcagt
gctagtgtgatagtgaagccgccctcacaaactttgtccactcagatggctgccagtcag
caaagtgtggacactaatttagtcagcagtattcctcttccaggacagagtgcagaacct
tttaagtcccatgaaatgttaaatcaagccagtgttattgtacattccagtggtgcccaa
ggtctgcaggtgcctggaccagcttattctggttcccccctccctgacccccggtacgta
ccaggggacaggcgtgctgaccaagtcagccaggccaacacccaatcatcatcacaggac
aggagcctggacacccagtccccgtctatgggctctctccccacagattcctctgggacc
tccttgatgtccggggttacaacacagtgtagtactggtggaacctcgtccctggcaaag
agtagtacagagagcagtggagtgtccatggacgccttacagggagctatgatggagtca
cggtccctacagtccctgtcctcggagagcatgtctgactccgcccccttccctgaccag
accccagggccatccaccatggagatggctgaccagagaccccagtcctctagcgatgga
ccctccatgcaggccagctacaatgactctctgcccccaagctctgtggacaatggacta
gatcttgtgggagctcatgagaatgtgtgtaacacggtggacatagaaacctcagctgtc
cccccaggtctgggacctgtcaggatgaatcctctcagtaatttggtgtcacatgacgtg
ttgctgggccgctggcgcttggccctggacctgtttgggcgtgtcttctgcgatgatgtg
ggctcagagccagggtcagtcatcagtgaactcgggggtttccctgtcaaggaaagcaag
ttccggcgagaaatggagaaaatccgaaactctcagcaaagggacatcattttagatgtg
gagagagacagaaatttgctgatcgtgcagtctttcaaacaactgaacactcagtataac
aggagaaccaacactagtggtcccccactggctgtacatagggtcaaggtcaccttcaag
gacgagccaggggagggaagtggagtcgctcggagcttctacactgccatagctaacgct
gttttgtcgcaagagaagcttccttccctggacggtgtgctgattggtggcaaaaaccta
cagtacaatttactacaaagagccagatcaagggaaagggagagagagagacagcgaacc
agtctacgtaggcagaggagcagggagagggatacgcggcgtaacctgtcctacgatgcc
ccgcccttctacatgccagccgacgctcctacctccaacaataatccaagctctgctgga
ccgccatcctcggactccagctcggatggggcccctgacacagtgtcacagtaccgcaga
cagctgggggagaggctctaccctaaagtccgggcactgcaaccgtccctggcacccaag
attacggggatgttactggagctgtctcccgcccagctgttactgatgctgacatctgag
gagacactgagacagagggtggatgaggctgtagatatcatcatgtcacatgggagggag
ttgagtgcagaggcccttttagacttggacatctttaatctgtcagccaatgacaagaag
aagaaatcgacagagcgtaaagcggaagtggaagaagaggaggaactggaagataacagt
ccactgttctggcagcccggaaaacggggcttctactctccccgcccaggcaaaagtgct
cctgagaggctcaatgcatttaggaatgtgggaaggataatcggcctttgcttgttacaa
aatgagatgtgcccactgttcctgaatcgccacgtcctgaagtacatcctgggccgtaag
attggctggcatgacctggccttcttcgacccagtcatgtacgagagtctccgacagctg
gtcctggactctgagcacaaagacgcctccgtcctctttgctgccttggacatgaacttc
tttgtacaacttggagcagaggagggtggggaggaggtggaactgatccctgggggtaat
gatattgaggtcaacgcccaaaatgtccatgattatgtgcggcgctatgcagagttcaga
atgaccaaagttctggacaaggctctcaagcacattaagctgggcgtgtttgacgtaatc
cccagtaactccctggagggcctgactgccgaggacctgagactcctgttgaatggggta
ggagacatcaatgtccagaccctcattagctacacctccttcaatgacgagagcggtgag
aacaatgacaaggtgcagagatttaagcgatggttctggtccgttgtggagaaaatgaac
aaccaggaaagacaagatatggtgtacttctggacatccagtccagctcttcctgctagt
gaggagggatttcagccaatgcccagcatcacaatacgccccgcggacgacgaccatctt
cccacggccaacacctgtatatcacggctatatataccgctgtattcatccaaggtggtg
ctacgcagtaaaatcatcctggccattaaaacaaaggcatttggatttgtgtag
DBGET
integrated database retrieval system
