Magallana gigas (Pacific oyster): 105325707
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Entry
105325707 CDS
T03920
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105325707
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
crg03310
]
105325707
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105325707
Nuclear receptors [BR:
crg03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
105325707
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105325707
NCBI-ProteinID:
XP_065937743
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Position
4:complement(23102365..23111473)
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AA seq
552 aa
AA seq
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MSKDPRPVVHKNQVKRKVSKRLGQKRDKYLPESLPLLLPPCKICGKKASGIHYGVNTCEA
CKGFFRRYLKRKEPYVCDKGWNCDLDIRSKGPHCSACRMKKCLTLGMSKEGVRQGRYTLT
ERTNRILEFKRLEKSRTNEWTCQDKKSNPDESFQTDSRHYDNSEKFSTELEDSECNPDKS
IKTEGRTGYDPYESIHDSEHNLNDYSEDTCSSSRMDMLYSERLQNSLDHSCSGKQAMLLE
LSSLAAHSGDYPTEYTSSSAEGSPQGKQTPRNTGTPMDSELPADVQEVVEALMKAYKHLQ
HITQSLSDEEIRNRLDIGFARHQDKVNLFGNLDPIPTKEYNEIFEKTNLDVDSRTQNSSR
RREEFGLAMADYVAFSNEIPGFNELSARDKATLVKVSRLDFFLSLEYRAKDPETEMMISY
SGRAAHLSDACAYLPQDMLRSWWKLTYDLRGLQMTTEEHATLLALCLMSTDRCKLESPES
VQKIEATLVKTMMSLLQRRYGERAGLQFSSYISLLTKLRGISEEYHAVYRKICEDKVLIA
RAPELLSMLFDD
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggaccctcgacctgtggtccacaagaaccaggtcaaacgcaaggtcagcaag
aggctgggtcagaagcgggacaagtacctgccggagagtctccccctcctcctgcccccc
tgcaagatctgtgggaagaaggcctcggggatacattatggggtcaacacttgtgaggcc
tgcaagggcttcttcagaagatatctgaagaggaaggagccatatgtttgtgacaagggc
tggaactgtgaccttgacatcagatctaagggtccacactgctccgcatgtcgcatgaaa
aaatgcctcaccctggggatgtctaaagaaggagttcgacaaggccgctacacattgaca
gagagaacaaaccggatcttggaattcaaacggctcgaaaaatccagaactaatgaatgg
acttgtcaggataaaaaatccaatccagatgaatcattccaaactgacagtagacattat
gataactctgagaaattctcaacagagctggaagattcagaatgcaatccagataaatcc
attaaaactgagggaagaactggatatgatccatatgaatccatacatgatagtgaacac
aatttgaatgactatagtgaagatacatgttcatctagcagaatggacatgctttatagt
gagcgcctccagaattccttggaccacagttgttctggtaagcaggccatgctgcttgaa
ctatccagtttagcagcccactcgggggactatccaactgaatacacttccagcagtgcc
gagggttcgcctcaggggaaacagacacccagaaataccggcacccccatggactccgag
ttgcctgcagatgttcaggaagttgtcgaggcattgatgaaggcttacaaacatcttcag
catataacacagagtctcagtgatgaggagataaggaacagactagatatagggtttgca
agacatcaagataaagtgaacctttttgggaatcttgacccgattcctaccaaagaatac
aacgagatttttgagaagacaaacttggacgtggatagtcgaacccagaactcaagcaga
agaagagaagagtttggattagccatggcagactatgttgctttcagtaacgagattcca
gggtttaacgagctttctgcaagagacaaagctacattagtaaaagtgtctcgactagac
tttttccttagccttgagtaccgagctaaggatcccgagactgagatgatgatctcatac
tcgggtcgagctgcacatctctctgacgcctgcgcatacctccctcaggatatgttgaga
tcttggtggaaactgacttacgatctgagaggactacagatgacaacggaggagcacgcc
acactactggcgctgtgtctgatgtcaacagaccgttgtaaacttgagtccccagaatct
gtacagaaaatagaagctacacttgtcaaaaccatgatgtccctactccagaggcggtac
ggggagagggcggggctacagttctcctcctacatcagcttgctgaccaagctaagggga
attagtgaggagtaccatgctgtgtatcgcaaaatctgtgaggacaaggtcctcattgcg
agggcaccagaactactgtctatgctctttgatgactga
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