Magallana gigas (Pacific oyster): 105325909
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Entry
105325909 CDS
T03920
Name
(RefSeq) methionine--tRNA ligase, mitochondrial isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg00450
Selenocompound metabolism
crg00970
Aminoacyl-tRNA biosynthesis
crg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
105325909
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105325909
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
crg01007
]
105325909
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crg03016
]
105325909
Enzymes [BR:
crg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
105325909
Amino acid related enzymes [BR:
crg01007
]
Aminoacyl-tRNA synthetase
Class I (U)
105325909
Transfer RNA biogenesis [BR:
crg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
105325909
Prokaryotic type
Other AARSs
105325909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
SieB
PE
LiaI-LiaF-like_TM1
Motif
Other DBs
NCBI-GeneID:
105325909
NCBI-ProteinID:
XP_065925280
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All DBs
Position
8:complement(30186029..30228667)
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AA seq
545 aa
AA seq
DB search
MRLGKLCNLVWLRKNWPCLTHKSYCSNSKSIFITTPIFYVNAAPHIGHLYTALLADATAR
FYRLQGKDVVLSTGTDEHGLKIQASAAKHNKNPKLYCDEVSSQFKALFDRAGVSYNHFIR
TTDKTHTRAVQHFWETLVRKGHIYKGQYEGWYSVSDEEFLSEEEVCDQKLESGETQKVSV
SSGQPVVWMAEENYMFRLTSFGPQLREWLNSGVIYPKEKRNQAEMILKNLQDLSVSRSRS
RLSWGIPVPGDSSQTIYVWLDALINYLTVAGFPDDLQNWPADIQIVGQDIIKFHAVFWPA
FLIAAGLDLPKQIVCHAHWTVDGYKMSKSRGNVVDPQERMNKLTESGFRYFLLKSGNTFT
NCNYNDEVAKELINAEIVNTYLNLLSRSSSKSINKQAIFPSFDEGDFQTFFTEEERDMFN
NLPDLTETCTTHYEGLLCYKASEAIFEYIRWSNKLFNDHEPWHMCKDPANDNHLNCLLYV
TMETLRVCSILLQPLIPDIAAQVLDRLGVRDDDRLFRHCKERRQSHRDQDHHLKVQKNHI
MDRIK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcggtaaattatgcaacctggtgtggttgcggaagaattggccctgtcttaca
cacaagtcctactgttctaactcaaagtcaattttcattacgacgccgatcttttatgtc
aatgctgcgccacacattggacatctctacacggccttgttggctgatgctaccgcccgg
ttctaccgtcttcaagggaaggatgtcgtgctctccactggaaccgatgagcatggattg
aagattcaagcttctgcagcaaagcataataaaaatccaaagttatattgtgatgaagta
tcctctcagttcaaggccctgtttgatcgagctggtgtgtcctataaccactttataaga
acaacagataaaacgcacaccagagctgttcaacacttttgggaaactttggtgaggaaa
ggtcatatctacaaagggcagtatgagggctggtattctgtgtctgacgaggagttcctc
agcgaggaggaggtgtgtgatcagaagctggagtcaggagaaactcaaaaggtctccgtg
agcagtggacagcctgttgtgtggatggctgaagaaaactacatgttccggctaaccagc
tttggaccccagctgagggagtggctaaattctggagtgatctatcctaaagaaaaaaga
aatcaagctgaaatgattctgaaaaacttgcaagatttatcggtatcccggagtagatcc
aggctctcctggggaatccccgttcctggtgattcctcccaaacaatttatgtgtggttg
gatgccctgataaattacctaacagtggcgggatttcctgatgacctacagaattggcca
gcagacattcagatagtggggcaggacatcatcaaattccatgctgtgttctggcctgca
ttcttgatagctgcaggtttagatttacccaaacagattgtctgccatgcccattggaca
gtggatggttataagatgtccaaaagtaggggcaatgtggtggatcctcaggagcggatg
aataaactgacagagtctgggttccgatacttcctcctgaaatctgggaataccttcaca
aattgtaattataatgatgaagttgccaaggagttgataaatgctgagattgtgaatacc
tacctcaacctactgtccaggtcgtcctctaagtctataaacaaacaggcaatttttcca
tcatttgatgaaggtgactttcagaccttcttcacagaagaggaaagggacatgttcaat
aatttacctgatttaacagaaacctgcaccactcattacgaagggctgctgtgttacaaa
gcaagtgaagccatctttgaatacatcagatggagtaacaaactgttcaacgaccatgaa
ccatggcacatgtgtaaggacccagccaatgacaatcacttaaactgcttactgtatgtt
accatggaaacattacgagtgtgctctattcttttacaaccactgataccagatatagca
gctcaagtgttagatagacttggagttagggatgatgacagactgtttagacattgtaag
gaaaggagacaaagtcatcgggatcaagaccatcacctcaaagttcagaaaaaccacatc
atggacagaattaagtag
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