Magallana gigas (Pacific oyster): 105326032
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Entry
105326032 CDS
T03920
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105326032
04121 Ubiquitin system [BR:
crg04121
]
105326032
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
105326032
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
105326032
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF629
Motif
Other DBs
NCBI-GeneID:
105326032
NCBI-ProteinID:
XP_019921793
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Position
5:42213723..42216497
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AA seq
667 aa
AA seq
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MVVMIQLKTKQEKMASEVDDEINNNEMEIFPYPGKAKSDVWKFFGFLKKTDGPPIKANLD
MTTAICRVCKKKYANKGNTTNFRMHIDGEHYGDLEPKLKQKSQPRLDSFLKTNKPVGKIS
PERQSTIDDALNKMIVGKVLPVSIVDNIYFRAFVELLDPRYQVPSRPTVIKRLEEKKLKV
EDKLKSQLKLSADISITHDGWTSLNTESYYTTTVHFIDNDWCLQSAVLGTIKLAGSHTGQ
NIANELKNTQDRWSLPKPTATSDNAANEQKAYEILGWNRFGCYGHRINLIVKNSLSFPEV
TRVLGKARTLVGFFHKSSSMTDMLHEKQKLLFSDSKVGHRLLIDVATRWNSTLFMLQRLL
EQAPVLMALANDTSLPKHASTTLKNSVFNFDELTLVENMVKILVPFEKATTLVCADQHPT
MHKVLPIVTKLMRATEISDDDAAVIKKIKQKMLAEMSKRTQSEDISLMACLLNPFTKGLD
FVSEEREKAHGLLRGLVCGITIVKKEKDTQEAPEGEVSAEKDNNVPALPNLNLPDNETGH
EVHDLSQPSAAKKLKSADTDDWLEDVVCVGESLDVGSAAEHEIERYLGCQIDAVDHNLTV
LEWWKKNSLFFPRISILAKKFLAIPASSVSSERVFSLGGQIVSKKRCRLSHSNVDLFIFL
NKNMKYW
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggtagtcatgatacaattgaaaacgaaacaagagaaaatggcgtccgaggtcgacgac
gagataaataacaacgagatggaaatatttccctacccggggaaggcaaaatctgatgtg
tggaagttctttggctttctcaaaaagacggatggtccaccgataaaagctaatttggac
atgactacggcgatttgccgagtatgcaagaaaaagtatgcaaacaaagggaacacgacg
aattttcggatgcacatcgatggcgaacattacggtgacttggaacctaaattaaaacaa
aagagtcagccccgtcttgatagcttcctcaaaacaaacaaacctgttgggaaaataagt
ccagaaaggcagtcaacaattgacgatgcattaaacaaaatgatcgttggcaaggtttta
cctgtgagcattgttgacaacatctacttcagggcctttgtggaactcttagatccgaga
taccaggtaccttcccggccaactgtcatcaaacgattagaagaaaaaaagttgaaagtt
gaagacaaacttaaaagccagttgaagctctctgcagatatatctataacacatgatggc
tggacaagcttgaacacagagtcatattacacaacaactgtacattttattgacaatgat
tggtgtttgcaaagtgctgttttaggaacaataaaacttgcagggagtcacacaggtcag
aacatagctaacgaacttaaaaatacacaagatcgttggtcccttcctaaaccaactgca
acctcagacaacgcagcaaatgaacaaaaggcttatgaaattcttggttggaatagattt
ggatgttatggacatcgaatcaatctgatagtgaaaaactctctgtcatttcctgaggta
accagagttttagggaaggccagaacactggtaggttttttccataaatccagtagcatg
acagatatgctgcatgaaaagcaaaaattactatttagtgacagtaaagtgggacacagg
cttctgattgatgtggcaaccagatggaactcaactctgttcatgctacaacgtctcctt
gaacaagcaccagttcttatggccttagctaatgatacatccttgcccaagcatgccagt
acaactctcaagaactctgtattcaattttgacgagttgaccttggttgaaaacatggtg
aagattcttgtcccatttgaaaaagctaccacccttgtttgtgcagatcagcatcccacc
atgcacaaagtccttcccatagttacaaaacttatgcgagcaactgagatttcggatgat
gatgcagcagttataaagaagataaaacagaaaatgctagcagagatgagcaaaagaaca
caatcagaagatatttctcttatggcctgtttgttgaatccttttacaaaaggcctagac
tttgtatcagaagagagagaaaaggcacatggtctcctgagaggattggtatgtggaatt
accattgttaagaaagagaaagacacccaagaggcacctgaaggagaagtctcagcagaa
aaagataataatgttcctgctcttccaaacctaaacttacctgataatgagactggccat
gaagtccatgatctttctcagccatctgctgcgaaaaaactgaaatcagccgacactgat
gattggttagaggatgtggtatgtgtaggagaaagtttagatgtaggaagtgctgcagag
catgagattgaaagatacctaggttgtcagattgatgcagttgatcataatttaactgtg
ttggaatggtggaagaaaaattctctattttttcctaggatctcaatactggccaaaaaa
tttctggccatcccggcatcatctgtgtcatctgagagggtttttagtcttgggggacaa
attgtttctaagaaaagatgcagactcagccacagcaatgtggacttattcattttttta
aacaaaaacatgaagtactggtag
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