Magallana gigas (Pacific oyster): 105326171
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Entry
105326171 CDS
T03920
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crg03021
]
105326171
Transcription machinery [BR:
crg03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
105326171
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
BRF2-like_C_cyclin_rpt
NAT_N
Motif
Other DBs
NCBI-GeneID:
105326171
NCBI-ProteinID:
XP_065944777
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All DBs
Position
6
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AA seq
503 aa
AA seq
DB search
MVCFPTARRLYSDPCLYIPRFAHKLEFGEKTHEVSMTALRLVSRMKRDWMHTGRRPSGLC
GAALLVAARMHDFSRSVKDLIKIVKVCDSTIRKRLTEFKNTPSSQLTIEEFQTIDLEEEQ
DPPSFTEGKAKAQKAKQLQIEQTMFPQIESEMSDLQKEIEKGLVPAKPRGIWASYANASN
SPNISAENSRANSPDLSESGIKNASNFLEDETLKTCLNEVDLEKEKLVNEQEELKTERKP
LQETIGMIDVVKKCVNEDEGESEKAEDGELDLTGIDDDELEKQFVLTEEEIELKTNLWMA
ENKDYLIALKEKEERLAKEREEEAKNPEKKKPKRTRKKRVPIQAASAEEAIYKVIHERKI
SNKINYDVLNDLKCQSGLQPATPVDSQPPPTPLQTEDLSEASRMVESNGSHIARDIKEPD
RKKIKLEKMDFRDSKTESIGGDTSAVVVENGPVQYIENLKEEEADLEEEEELDDEDEPVS
AAKLLGHHHQVQDYEDHDLYDDD
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgcttcccgacagccagaagattatacagtgacccctgtctttacattccaaga
tttgctcacaagttagagtttggggagaagactcatgaggtttctatgacagcacttcgt
cttgtatctcgaatgaagcgggactggatgcatacaggtcgccgtccgtctgggctttgt
ggagcagctttgctggtagcagctagaatgcatgatttttccagaagtgtgaaggatctc
ataaaaattgtcaaagtgtgtgacagtaccataagaaaaagattgacagagttcaagaat
actccatccagtcagttgacaatagaggagtttcagaccatagacttagaagaggagcag
gatccaccatcatttacagagggaaaggccaaggcacagaaagccaaacaattacagatt
gaacaaaccatgtttccccaaattgaatcagaaatgtcagatctgcagaaagaaatagag
aagggcttggtacccgcaaagcctcgtggaatatgggcttcttatgcaaatgcctcaaac
tcaccaaacattagtgcagaaaattctcgagccaattctcctgatttatcagagagtgga
ataaaaaatgccagcaatttcttggaggatgagacgttaaaaacatgccttaatgaagtt
gatcttgagaaggaaaagttggtaaatgaacaggaagagttaaagactgaaaggaaaccc
ctgcaagaaaccattggaatgatcgatgttgtcaagaagtgtgtaaatgaagacgagggg
gaatctgaaaaagcagaggatggtgagctggacttgacagggatcgatgatgatgaatta
gagaagcaatttgtgctgacagaggaagagatagaactaaaaactaatttgtggatggca
gaaaataaggattatttaatagctttgaaagagaaagaggaaaggcttgccaaggaaaga
gaagaagaggctaagaacccagaaaagaaaaagcctaaaagaactcggaaaaagcgagtg
cccatacaggcagcctcggcagaggaagctatttataaagtcattcatgaaagaaagata
tccaacaagatcaactatgacgtcctaaatgatctgaagtgccagtcgggcttgcagcca
gccactcctgtggattcccagccaccccctacacccttacaaacagaagatttgtccgaa
gctagcaggatggtggaaagtaatggaagtcacatagcaagggatataaaggaaccagat
agaaagaagataaagctggagaagatggactttagggattcaaaaacagaatcgattgga
ggcgacacttctgctgtggtggtggagaacggacccgtccaatacatcgagaatctcaaa
gaagaagaagctgatctggaagaggaggaggaactggatgatgaagatgaaccagtcagt
gcagctaaacttctgggtcatcatcaccaagttcaagactatgaagatcatgatctatat
gatgacgactga
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