Magallana gigas (Pacific oyster): 105326215
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Entry
105326215 CDS
T03920
Name
(RefSeq) LIM domain-containing protein ajuba isoform X1
KO
K16682
LIM domain-containing protein
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105326215
03036 Chromosome and associated proteins [BR:
crg03036
]
105326215
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105326215
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
105326215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
105326215
NCBI-ProteinID:
XP_065936573
LinkDB
All DBs
Position
3:56046759..56068505
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AA seq
709 aa
AA seq
DB search
MSENRNIVIGRTSYPAPGGSMLNQTISQMHMSQQIGMGNAQMMIGGTHASSCMYSGMVKP
GSNYSSPRSSVGSGGDSKGSSPRTSLTNPPPPPPYDQRFGSPRSSLASPRSSISCTSYES
KLSSPRTSLAGMSGVMLDKFPPSPRNSLVLDNYGQYHPNVSLGPTKNVYLLNDSRFNEPA
PHAPPAYTDPRLRMHASHVSVSQMNNQNLNGSHFHKQMNGKLNYSMSGSGSMNSLPGSQG
TPPAIPARIPLNSASSNKNFEVELAVLTQQLEDSMKMTGSQNFPGEQTVHKQPPPPYHGP
HKTEPVPSLPPRNPRYTTASPNFIHTSQHHQQPLTSTSQTGFVTSTVPTHGKNPPSVAVR
PQTQQIPFHVTAHHGKSVTDSIEQKVAALTQQLEDDMEKSPQGEYFGQCFTCGERVAGAT
EACQAMGNLYHTRCFVCCSCGRTLRGKAFYNVHGKVYCEEDYLYSGFQQTAEKCCVCGHL
IMEMILQAMGKSYHPGCFRCCVCNDCLDGVPFTIDVDNKIYCIADYHRVYAPKCAACGQA
ITPVEGTEETVRVVSMDKDFHVDCYHCEDCGVQLTDEADKRCYPLDNHLFCHGCHIQRLQ
AQFPDEHFFYDPVTKNIQNTVTKDGKQRNSIAITPASLESYPQNLPPSLSHPQTMSKSDS
PSSSVPASPAMMNGGSYNYPGRYDGYRPQPGPQVPSLKPGATRYQVTDL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaatcgtaacatcgtgatagggaggacgtcttatccagcgcctggaggttca
atgctgaaccaaacaatctcccagatgcacatgtctcaacaaataggaatggggaacgcc
caaatgatgataggggggacccacgctagttcctgtatgtattcgggcatggtgaaacct
ggttcaaactattctagtccacgctccagtgtgggaagtggaggggattccaaagggtcg
agtccgcggactagtctgaccaacccgccccctcctcctccatatgaccagagatttgga
agtccgcgctccagtcttgccagtccaaggtctagtatatcctgtacatcatatgaatct
aaattatccagtccgcggaccagtctggctgggatgtccggagtgatgctggacaaattc
cctcccagcccccggaacagtttggtcctggataactatggacagtatcacccaaatgtt
agtctgggacccacaaagaatgtgtatctattaaatgacagtcgctttaacgagcctgca
cctcacgctccacctgcatatacagacccaagactaagaatgcatgcgagtcatgtaagt
gtgtcccaaatgaataatcaaaatcttaatggatctcattttcacaaacagatgaatggt
aagctgaattattccatgtctggaagtgggagcatgaacagtttacctggttcccagggg
acgccaccagctattccagctaggatccctttgaattcagcatccagcaataagaacttt
gaagtagaactagcagtgttaactcaacaactggaggacagtatgaaaatgaccggatct
cagaatttccctggggaacagacagtgcataaacaaccccctcccccttatcatggtccc
cacaagacagaacctgtccctagtctaccacccagaaatccacgatacacgactgccagt
cctaatttcattcacacttctcagcatcaccaacagcctctgacgtccaccagccaaacc
gggtttgtgacctcaacggtccccactcatgggaagaaccccccctccgtggctgtgaga
ccccagacccagcagatcccattccatgtgaccgcccatcacggaaaatctgtcacggac
agcattgaacagaaagtggctgccctcacccagcaattagaagatgacatggagaagtcc
ccccagggggaatacttcggtcagtgctttacatgtggggagagggtggcaggtgctacg
gaggcgtgtcaggccatgggcaatctgtaccacaccaggtgcttcgtctgctgctcctgc
ggtcgtacgttgcggggcaaggcgttttacaatgtccatggcaaggtgtactgcgaggag
gattatctgtactctggtttccaacagactgctgagaagtgctgtgtttgtggacatctg
atcatggaaatgatattacaagccatggggaagtcctatcatcctggctgcttcagatgc
tgtgtgtgcaatgactgcttggatggagtccccttcaccatcgacgtagacaacaagatc
tactgcatcgctgactatcacagagtgtatgcgcccaagtgtgcagcatgtggccaggct
ataaccccagtagagggtaccgaggagactgtgagggtggtgtccatggacaaagacttc
catgtggattgttaccattgcgaggactgcggagttcagctgacagatgaagccgacaaa
cgctgctatccactggacaatcacctgttctgccacggatgtcacatccagcgactgcag
gcacaattcccagacgaacattttttctatgatcctgtgaccaaaaatatacagaacacg
gtcaccaaggacggaaagcagcggaacagcatcgccatcaccccagcttcccttgagtcc
tacccccagaaccttcccccgtccctctcccacccccaaaccatgtctaaatccgactcc
ccctcttcctctgtcccggcctccccagccatgatgaatggggggagctacaactacccg
ggtcgatacgacggttaccgcccccagcctggtccccaagtccccagcttaaagcctggc
gccactaggtaccaggtcaccgatctgtag
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