Magallana gigas (Pacific oyster): 105326250
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Entry
105326250 CDS
T03920
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG3
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04136
Autophagy - other
crg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105326250
04136 Autophagy - other
105326250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105326250
04121 Ubiquitin system [BR:
crg04121
]
105326250
03029 Mitochondrial biogenesis [BR:
crg03029
]
105326250
Membrane trafficking [BR:
crg04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
105326250
Ubiquitin system [BR:
crg04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
105326250
Mitochondrial biogenesis [BR:
crg03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
105326250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
PCYCGC
Med13_N
Motif
Other DBs
NCBI-GeneID:
105326250
NCBI-ProteinID:
XP_011424456
UniProt:
A0A8W8J279
K1R934
LinkDB
All DBs
Position
8:complement(2693898..2702418)
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AA seq
321 aa
AA seq
DB search
MQNVINAVKGTALNVAEKFTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWSTGDE
SKVKPYLPKEKQYLITRNVPCYKRVKQVDSHKEEQEKVIEADDEDGGWVDTHHFPDPGTT
SLQDAVQEMTLDGKGKDRKSSSEEVKRSGDDDDDDDDDDEEAMDMEAFEQSGMLDEEDDA
ALDPSTLGRQDSESAATESGILQTRTYDLNITYDKYYQTPRLWLFGYDENRKPLTVEQMY
EDFSQDHAKKTVTMEAHPHLPGPPLASVHPCRHADVMKKIIQMVAEGGGDLGVHVYLMIF
LKFVQAVIPTIEYDFTRDFTM
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatgtgatcaatgctgtaaaaggaacagcccttaacgtcgctgagaaattcaca
cctgtattgaaagaatccaaattcaaggagaccggagtaataaccccagaagagtttgtg
gcagcaggggaccacctggtacaccactgtcccacctggcaatggtcgaccggtgacgag
tccaaagtgaagccctacctccccaaggagaagcaatacctcattactaggaatgtgcca
tgttacaaacgagttaaacaagtggacagtcataaagaggaacaagaaaaagtgatagag
gcagacgatgaagatgggggatgggtagatacgcatcatttcccagatcctggtacaaca
tcactacaggacgctgtacaggaaatgaccttggatggcaagggcaaggacaggaaatca
tcatctgaggaagtgaagagatcaggtgacgatgatgatgatgatgacgatgatgatgag
gaagcgatggacatggaagcgtttgaacagagtggaatgttagatgaggaagatgatgct
gccttagacccctccacccttggtcgacaagattcagagagtgcggccacagagagtggg
attctacaaacacggacctatgatctcaacatcacatacgacaagtactaccagacaccg
cgcctctggctgtttggatacgatgagaaccgtaaacccctcactgtagaacagatgtat
gaagactttagtcaagaccacgccaagaaaactgtcaccatggaggcccaccctcacctc
cctgggccccctttggcatcggtccacccctgcagacatgctgatgtgatgaagaagatt
atacagatggttgcagagggaggaggagatcttggggttcatgtctatctgatgattttt
ctgaagtttgtacaggcagtgattccaacaatagagtacgacttcacccgagacttcacc
atgtga
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integrated database retrieval system
