Magallana gigas (Pacific oyster): 105326545
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Entry
105326545 CDS
T03920
Name
(RefSeq) DAZ-associated protein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105326545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105326545
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105326545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
105326545
NCBI-ProteinID:
XP_011424946
LinkDB
All DBs
Position
6:complement(7205616..7217075)
Genome browser
AA seq
546 aa
AA seq
DB search
MHRGFNKNSNGIPRNEAGKLFIGGLSWDTDQDSLLNFFSQYGEVIDCVVMKNQQTGKSRG
FGFVTFNDAQCVDTVLSAAPHTIDGRQVDAKPCNPKAANKGPKDGGGRIHGGGGGGGGGG
DKDKKIFMGGLPNVDEDFLRNFFGKYGKVLDVNIMIDQQNKKSRGFGFLTFESEDAVDQV
CAEHFININGKQVECKRAEPRDGRDNKQGGYGGRRGHGQDMMGPPHGMDGGWNQGGNWNQ
GPPPHGPPPPGPPMGNMGFPPQGPGGYQQQQPPPGQGFPPQQGPPPQPSYQGYQSPPGYQ
QGGWGGQPPNASPGQQGAWPPQSAAPPQAVPPPADTQQSYAGYASPQAGYSQPPTTAYSQ
WGATASSPVAPQPAAAQPPTQQPAQPSYSPYGQPPAAAAAPATPGYTPAPGTQSYSSHYN
VAVADPSQPATPTTAQAGYSTYNPYGAPQTPASAVPDPYAPTSQPATAPGAQVPMGVPDP
YAQPPVAQPPAAPGYGDPPGFGVAPQPAAGYGGQGDGQAGGYAAQPGGGYQRPSVSSAQG
YHPYRR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgaggattcaacaaaaattcaaacggcattccaagaaatgaagcaggaaagttg
ttcattggtggattaagctgggatacagaccaagattctctgctgaacttcttcagtcag
tatggagaagtcatcgactgtgtggtcatgaagaatcaacagactgggaaatcacgtgga
tttggttttgtcacatttaatgatgcacagtgtgtagacacagtcctctctgctgcgcca
catacaattgatggcagacaggttgatgccaagccatgcaatcccaaggcagcaaataag
ggaccaaaggatggaggtggaagaatacatggtggagggggagggggtggtgggggtgga
gacaaggacaaaaagatattcatggggggtcttcccaacgtcgacgaagatttcctcagg
aacttctttggaaaatatggaaaggttctggatgtcaacataatgattgatcagcaaaat
aaaaagtccagaggctttggatttttgaccttcgagtcagaagatgcagtagatcaagtt
tgtgcagaacattttataaacatcaatggaaaacaggtggagtgtaaacgagccgagcca
agagacggccgagataataaacaggggggctatgggggtcgtagagggcatggacaggac
atgatggggcctccacatggaatggatggaggttggaaccagggagggaactggaaccag
ggtcctcccccgcatggaccgcccccacctggacccccgatggggaacatgggattccca
ccccaggggcctggaggatatcaacagcagcaacctccacccggacaggggttcccccca
cagcaaggcccacccccacagcccagttaccaaggataccagtctcctcccggatatcag
caaggagggtggggaggacagccccctaatgcatcacctggtcaacaaggtgcctggcca
ccccagtccgctgcacccccacaggcagtgccccctcctgcagatacccaacagtcctat
gctggatatgcgtctcctcaggctggatatagccagccccccaccacagcctattcacag
tggggagccactgccagctcccctgtggcccctcagccagctgctgcccagccccccacc
cagcagccagcccagcccagctacagtccctacggacaacctccagcagcagctgctgcc
ccagctactcccggttataccccagccccggggactcagtcatacagctcacattacaat
gtagcagtcgctgatccatcccaaccagcaacacccacaactgctcaagcaggatacagc
acatataacccatatggagccccacagacaccagcttctgctgtgcctgacccctatgcc
ccaacttcacagccagccactgccccaggagcccaggttcccatgggagttcctgaccct
tatgcccaaccccctgtagcccaacctcctgctgcccctggatatggagatcctccaggt
tttggtgtggccccacaaccagcagctggatatggaggtcaaggtgatggacaggctggg
ggatatgctgcccagcccggcgggggataccagaggccttcggtgtcctcggctcaagga
taccacccatacagaagatag
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