Magallana gigas (Pacific oyster): 105326650
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Entry
105326650 CDS
T03920
Name
(RefSeq) nucleolar protein 6 isoform X1
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105326650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crg03009
]
105326650
Ribosome biogenesis [BR:
crg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105326650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap
Nrap_D4
Nrap_D3
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
105326650
NCBI-ProteinID:
XP_011425096
LinkDB
All DBs
Position
6:complement(56339283..56352055)
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AA seq
1161 aa
AA seq
DB search
MKRKQQSVALAESIDSDQENSESDESFSDDGEGDTDDADQSVARNSKTPPEKKAKISKKE
LYRPPTNEELNQLKETENLFHSSLFRLQVSELLNEVQLKAKRRKQMEEAVMTVSQMIRSL
KRTVEHELQSQKWLKNIKAPIHQKPRAVKGKFQFVPPAEILTTGSFVTGTCIKPNITVDL
VVVIPQECFQEKDFMNHRYLRKRALYLAVIAKRLHEIHGLKDLQYTYHHGNALKPSLIVN
FPSGEHRPVCLNITAVPEDGVFKLSRFHISKNNVRRQWFLEEGAGDSDTDKSSPTPFYNN
TVLQDLTLRENATYLQSTLGDNPNLRDGIALLKVWLRQRELNQGFGGFSGFLISVFVAYL
ITQRKINHLMSSYQVMRNVLLHLAQSDWTKEPLTLCSSFDAFEQPDPCLFYEHFAVTFVD
VTGYVNLCSDISKGLYDRVRHEADLALKFLENHSMDSFAALFMTPVEFFRKFDVTFQIQN
ISKTEVEKLGIENKYVDYGGNIVQSLGSDLHALISRGLGQRVCVTQVRQSPTPKWDISSD
PPDCEPAEPVQVGLLLNPEFAFSVLDKGPPAESPEAKEFLDFWGDRSELRRFKDGSVCEA
VPWTKKSLLSEKRMVCCRVVQHVLERHVGISLESVKCFVDQLDPLLQCPVNNDSDDVCGT
GEEQHNDVIQKYDELCKLLRNLKDLPLSINSIQGSAPVFRYSEVFPPLPALCNKEHVVEK
GGRDLPQNYTKQCPQYNMSLNVICLLEGSGKWPDEKKAFNRLMAAFHIQLAESIKTQYGF
PVSVYPRHIDVVKDNYVFRVVLGYTREIALTKMVKTPEGMVKYKDNEEALTLEREIQGLP
RLTSTLHGIQQLHASFSSTVRLVKRWIAAQLLAEFVCDEAVEIIVAHLYLHPSPYTPPSS
PMVGFQRFLYLVGNHDWKNSPLMVNLNDEFTAEDYQEILGRFQRERSSRPLMFLSTPYDK
HASSWTRHAPSAPLLQRLVVLARGSLDVLNQLIQEGADNSSFKQLFRPPLETYDLIIHLA
RKQLPRQHEAVDREVIQLPVKTKGRVAKTTDPMDKLQYFPVYDYDPPSLFLNELKEIYGD
FALFFYDKYGGKYIAVLWKPTAFTPKDFKVSHLAGRKVKTMESGDKDVTVVPNLEAIVDD
FRILGRGLVSHIHVQQSNLKS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaaacagcagtctgtagcattggctgaaagtattgacagtgatcaagagaac
tcggagtcggatgaaagtttttctgatgatggagagggtgatacagacgatgcagaccaa
agtgttgcaaggaactccaaaacaccgccagagaaaaaagccaaaatctcgaaaaaagag
ctctatcgacccccgaccaatgaggagttaaatcaactgaaggaaacagagaacctgttt
cactccagcctctttagacttcaggtcagtgagttactgaatgaagtccagctgaaggcg
aagcggcggaaacaaatggaggaagctgtgatgaccgtgtctcagatgatcaggtcactg
aagagaaccgtggagcacgagttgcagtctcaaaaatggctgaagaacatcaaggctcca
attcatcagaaacccagggctgttaaaggaaagttccagtttgtgccccccgctgaaatc
ctgaccactggcagctttgtgaccgggacatgtatcaagcccaacattactgtagatcta
gtggtggttattccccaggagtgttttcaggagaaagatttcatgaatcaccgttacttg
aggaaaagagccctctatttagctgtcattgccaagaggctgcacgagattcatggattg
aaggatctccagtacacatatcaccatggaaatgcactgaagccaagtctgattgtaaac
tttccaagtggagagcacaggccagtctgtcttaacatcaccgctgtaccagaggatggg
gtgttcaaactcagccggttccacatcagtaagaacaacgtccgtcgccagtggttcctt
gaggaaggggcaggggactccgatacagataagtcctcccccacacccttctacaacaac
actgtcctccaagatctgaccctgagggagaacgcgacctacttacagagcacgctgggg
gacaacccaaacctcagggacggaatcgctctcctcaaagtctggctacgacaaagggag
ctaaatcaggggtttggcggtttctcgggatttctgatttccgtgtttgttgcgtattta
atcactcagcggaaaatcaaccatttaatgagcagctaccaagtcatgcggaacgtgctt
cttcatcttgcccagagcgattggacaaaagagcctttgaccctgtgttcatcctttgat
gcctttgagcagcccgacccttgcttgttttacgagcacttcgccgttacttttgtggac
gtcaccggttacgttaatttgtgttcagatatcagcaagggcctctatgatcgggttcga
cacgaggcagacttggccctcaagttcctcgagaaccactcaatggacagctttgctgcc
ctcttcatgacacctgtggaattcttcaggaaatttgatgtcacatttcaaatccagaac
atttccaagactgaagtagaaaagttgggtatagagaataaatatgtagactatggtggg
aacattgtccagtccctggggtcagacctacacgccctgatcagtcgtggactggggcag
agggtctgtgtcacacaggtcagacagagtccgacccccaagtgggacatctctagtgac
cctccggactgcgaaccagcggagcctgtccaggtcggactgttgctgaaccccgagttt
gccttcagtgtcctggacaagggaccccccgcggagtctccggaggccaaggagttcctc
gacttctggggagaccggtccgaactccgtcgatttaaagatggcagcgtgtgtgaagct
gttccatggaccaagaaatctctgctgtcagagaaacgaatggtgtgctgccgagttgta
caacatgttctagagaggcatgttggaatcagcttagagtcagtgaaatgttttgttgat
cagttggatcctttgttacaatgtcctgtaaataacgactcagatgatgtgtgtgggaca
ggggaggagcagcataacgatgtgatacagaagtacgacgaactctgtaaactactgagg
aacctcaaggacctccccctgtcaatcaattccatacagggctccgcccccgtcttcaga
tactcagaggttttccctccactaccggcgctgtgtaacaaagaacatgtggtggaaaaa
ggagggagggatctaccccagaactacaccaaacagtgtccacaatacaacatgtcactc
aatgtgatctgtttattggagggcagtgggaaatggccagatgagaagaaagcatttaac
cgactaatggctgccttccacatacagcttgcagagtcaataaagacacagtatggtttt
ccagtctctgtgtacccgaggcacattgatgttgtcaaggacaactacgttttccgggtg
gtgctgggatacacgcgggagatcgcgctcactaagatggtgaagacgccggaggggatg
gtcaagtacaaggacaatgaggaagccctgaccctggagagagagatccagggactcccc
cgcctcaccagtacactgcatgggatccagcagctccatgcctcgtttagctccacggtg
aggctagtcaagcggtggatcgcggcccaactcctggccgagtttgtgtgtgatgaagcg
gttgagatcatagtggctcacctgtatctccacccctcaccctacaccccacccagttca
ccaatggtgggctttcagcggttcctttacctggtgggtaaccacgattggaagaacagt
ccactgatggtcaatctgaacgacgagtttacagctgaggactaccaggagatcctgggg
agattccagagggagcgttcctcgcggcccctcatgttcctgtccactccgtacgacaaa
cacgcctcctcctggaccagacacgccccctccgcccccctactgcagcgactggttgtt
ctagcccgcgggtcactggatgtcctcaaccaactcatacaggaaggggcagacaactcc
agctttaagcaacttttccgacctccacttgagacttatgacctcattatacatctggca
agaaaacagttgccacggcaacatgaagcagttgatcgggaggtcattcagcttcctgtg
aagacaaaaggtcgcgttgctaagactactgaccccatggacaagctccagtacttccct
gtgtacgactatgacccgccctctctgttcctgaacgaactcaaggaaatatacggtgac
tttgccctgttcttctatgacaaatatggtggaaagtacatagcagtgttatggaaacca
acggcgttcacccccaaagatttcaaggtgtcccatttggcggggaggaaagtgaagacg
atggaatcgggtgataaggacgttactgtggtgcctaaccttgaggccattgtggacgac
tttagaattcttggacgaggacttgtgtcacacattcatgtacaacagagcaacttaaaa
tcctag
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