Magallana gigas (Pacific oyster): 105326760
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Entry
105326760 CDS
T03920
Name
(RefSeq) alpha-actinin isoform X1
KO
K05699
actinin alpha 1/4
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04517
IgSF CAM signaling
crg04518
Integrin signaling
crg04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
105326760
04518 Integrin signaling
105326760
04519 Cadherin signaling
105326760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105326760
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
crg04812
]
105326760
04147 Exosome [BR:
crg04147
]
105326760
Membrane trafficking [BR:
crg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
105326760
Cytoskeleton proteins [BR:
crg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
105326760
Exosome [BR:
crg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105326760
Exosomal proteins of colorectal cancer cells
105326760
Exosomal proteins of bladder cancer cells
105326760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CH
Spectrin
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAMSAP_CH
STB2_C
Motif
Other DBs
NCBI-GeneID:
105326760
NCBI-ProteinID:
XP_011425276
LinkDB
All DBs
Position
6:complement(16437746..16452595)
Genome browser
AA seq
888 aa
AA seq
DB search
MSEQDYDGYMEGEEEWDREGLLDPAWEKQQKKTFTAWCNSHLRKAGTQIENIEEDFRNGL
KLMLLLEVISGEQLPKPDRGKMRFHKIANVNKALDFIASKGVRLVSIGAEEIVDGNPKMT
LGMIWTIILRFAIQDITVEELTAKEGLLLWCQRKTAPYKNVNVQNFHLSWKDGLAFCALI
HRHRPELLDYYKLSRDNPLENLNTAFDVAEKHLDIPRMLDPEDMVNSVKPDERSVMAYVS
SYYHAFSGAQQAETAANRICKVLKVNQENERLMEEYERLASDLLEWIRKTTPWLENRTTD
NTLPGTQRKLEEFRDYRRKHKPPKLEDKARLENSFNTLQTRLRLSNRPAYLPTEGKMVSD
IANAWKGLEFAEKGFEEWLLSELQRLERLDHLAQKFRHRCQIHEEWAEGKEEMLQSQDYL
RCGLNQLKAMKKKHEAFESDLAAHQDRVEQIAAIAQELNLLEYHDVLTVNTRCQKICDQW
DRLGTLTAQRRQGLDEAEKILEKIDTLHLDFAKRAAPFNNWLDGAKEDLLDIFIVHSVEE
IQQLLEAHETFKQTLPEADKEFNAIMALASEVQRLANQVGLQLTDNPYTTVDPQDIANKW
ADVKHLVPKRDGTLQNEMMKQQNNMRLRKQFAAKANVVGPWIENQLDAVASMGIQTKSSL
EEQLKKLRQYEQATTQYKPNIDELERYNQEIQEAMIFENHYTQYTMETLRVGWEQLLTAI
ARNINEVENQILTRDSKGISEDQMNEFRVSFNHFDKNRSRRLEPKEFKACLVSLGYNIRD
DRQGDADFQRIMSIVDPNNSGYVTFEAFLDFMTRETADTDTAEQVMQSFKILAGDKPYIT
AQILRQELPPDQAEYCIQRMAPYSGRDAVPGALDYMSFSTALYGESDL
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaagattatgatggatatatggaaggggaagaggagtgggatcgagagggg
ttgctcgatccggcatgggaaaaacagcaaaagaagacattcacagcatggtgcaactct
catttaagaaaggctggtactcaaatagaaaacatcgaagaggattttcgaaatggttta
aaattgatgttattattagaagtgatctctggggagcagctccccaagcccgacagagga
aagatgaggttccataaaatcgctaatgtcaacaaagctttggacttcatcgcatccaag
ggtgtcagactggtgtccattggagctgaagaaattgtggatggaaaccccaagatgacc
ctgggtatgatctggaccatcattcttcgttttgccattcaagatattacagtagaagag
ctgaccgctaaggagggacttctgctgtggtgccaacgtaagacagctccttacaaaaat
gtcaatgtacagaacttccatctcagttggaaggacggtctggctttctgtgcattgatt
catcggcatcgtccagaattattagactattacaagttatccagggacaatccattagag
aacttgaacaccgccttcgatgttgcagaaaagcatctcgatattccacgcatgttagat
ccagaagatatggtgaactccgttaaaccagatgaaagatctgtgatggcctatgtttca
tcatactatcatgcattctctggggctcaacaggccgagacagctgcaaacagaatttgc
aaagtgttgaaggtcaaccaggaaaatgaacgccttatggaggaatatgaaagactagca
agtgatcttttggaatggattaggaaaacaacaccttggttagaaaacagaacaactgac
aatactttacctggaacccagagaaaactggaagagtttagggactacagacgcaaacat
aaaccccccaagcttgaagacaaagctcggctggagaacagttttaacaccctgcagaca
agactacgactgagcaacaggcctgcttacctccccactgagggcaaaatggtgtctgac
attgctaatgcatggaaaggattggaatttgctgagaaaggtttcgaggagtggttactg
tccgaattgcaaagacttgaacgccttgatcatttggctcagaagttcagacatcgatgt
caaattcacgaagaatgggctgagggcaaagaagaaatgcttcagagtcaagactatctt
agatgtggacttaatcaattgaaggctatgaagaagaaacatgaagcttttgagagtgac
ctagcagctcatcaagatagagttgaacaaattgcagcaatagcacaggagcttaacctt
ttagaatatcacgatgttctcactgtcaatacgagatgtcagaaaatctgtgaccagtgg
gatagattaggaactttaactgcccagagacgtcaaggtctagatgaagcagaaaaaata
ttagagaaaatagatacccttcatttggactttgcaaaacgggcagctcctttcaacaac
tggttagatggtgcaaaagaagatttattagatatatttattgttcactctgtagaagaa
attcagcaacttttagaagcacatgaaacctttaagcagaccctgcctgaagcagacaag
gaattcaatgccattatggctctagcctctgaagtccagaggctggctaatcaagttggc
ttacagctgacagataatccctacaccacagttgatcctcaggacatagcaaacaaatgg
gctgacgtgaagcatttagtgccaaaacgagatggaactctccagaatgagatgatgaag
caacagaacaacatgcggctgaggaagcagtttgctgccaaggccaacgtagtgggtccc
tggatcgagaaccagctggacgccgtggcctccatgggaatccagacaaagagctcgctg
gaggagcagctcaagaagctcaggcagtacgagcaggctaccactcagtacaagcccaac
atcgacgagctggagagatataaccaggagattcaagaggctatgatctttgaaaaccac
tacacacaatacaccatggagaccctgcgagttggatgggaacaacttcttacagcaatt
gctagaaacatcaatgaagttgaaaaccagatcttgactagggattctaagggtatcagt
gaagaccaaatgaacgagttccgtgtttctttcaaccatttcgataagaacaggtcacgc
cgtctagagcctaaagaattcaaggcctgccttgtcagtttgggttacaacatcagagat
gatagacagggagatgcagacttccagcgtatcatgtccattgttgaccccaacaactct
ggctacgtgacctttgaagccttccttgacttcatgacacgcgagactgctgacacagac
acagctgagcaagtcatgcagtccttcaagattttggctggcgacaagccatacatcaca
gcacagattctccgacaagaattgcccccggatcaggcagaatactgtattcagagaatg
gcgccatattctggccgcgacgctgtccctggtgctttagactacatgtcgttctccacg
gctctatatggtgaaagtgacctttga
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