Magallana gigas (Pacific oyster): 105326999
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Entry
105326999 CDS
T03920
Name
(RefSeq) serine/arginine-rich splicing factor 6 isoform X3
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105326999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crg03041
]
105326999
Spliceosome [BR:
crg03041
]
Common components
Common spliceosomal components
SR proteins
105326999
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
105326999
NCBI-ProteinID:
XP_011425562
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All DBs
Position
6:49778272..49784582
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AA seq
288 aa
AA seq
DB search
MGTRVYIGRLSHHARERDVERFFKGYGRLRDVMLKNGYGFVEFEDYRDADDAVYELNGKD
LAGERVIVEHARGGPRGDDRRNSYRDYPPARRSRGGGGRDNRASNRYGPPTRTEYRLIVE
NLSSRVSWQDLKDYMRQAGEVTYADAHKEHKNEGIVEFASYSDMKNAVSKLDGTEINGRK
IKLVEDKPKRSSRRRSISRSASRSRSRSRSRRRSRSGSRSRSRSRSRSSRSKSKSKSKSP
ARKSRSKSRSKSRSRSKSPSKSKSKSRSRSRSKSRSPSPGDKDDKDEN
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgggaacccgtgtttacataggaagattatcccatcatgccagagaaagagatgttgaa
agatttttcaaaggatatggacggttacgggatgttatgttgaaaaatggatatggcttt
gttgaatttgaagattatcgtgatgcagatgatgctgtctacgaactgaatggaaaagat
ctggctggtgaaagagtgatcgtagagcatgcacgtggaggtcctcgcggagacgacaga
aggaatagttaccgtgactaccctccagcccgcaggagtcgtgggggcggtggaagagat
aatcgtgcttccaacaggtacggaccacctaccagaacggaatataggttgattgttgaa
aacctgagttctcgggtcagctggcaggacctgaaagactacatgagacaagcaggggag
gtcacgtatgcggacgcccacaaggaacacaaaaatgaaggaattgtggaatttgcctct
tactctgacatgaagaatgccgtaagcaagttggatggaacagaaatcaatgggaggaag
atcaaattggtagaagacaaaccaaaacgcagcagcagacgcagaagtatcagtagaagt
gcctctagatccagaagtaggtcaaggtcacgacgtaggtctaggtcaggcagtaggtca
aggagtcgcagcagaagccgcagtagccgcagcaagtccaagtccaagtctaagtcacca
gcacgcaagtccagatctaagtccaggtccaaatccagatccaggtccaagtccccatct
aagtccaagtctaagtccaggtctaggtcaaggtcaaagtctcgttccccaagtcctgga
gacaaggacgataaggacgagaactag
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