Magallana gigas (Pacific oyster): 105327109
Help
Entry
105327109 CDS
T03920
Name
(RefSeq) E3 ubiquitin-protein ligase CHFR
KO
K10644
E3 ubiquitin-protein ligase CHFR [EC:
2.3.2.27
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105327109
Enzymes [BR:
crg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105327109
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105327109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CRD
FHA
zf-RING_2
zf-C3HC4_2
zf-C3HC4
Yop-YscD_cpl
zf-CCHH
zf-RING_6
zf-RING_UBOX
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
105327109
NCBI-ProteinID:
XP_065936198
LinkDB
All DBs
Position
3:complement(48875953..48896964)
Genome browser
AA seq
683 aa
AA seq
DB search
MEEAWGQLVSLTDVESEPVLITSDRLTIGRAPDCDISFAGNKLVSGHHCSVERDEDGQVW
LRDSSTNGTLLNLKVKVTKGNGKKLSHGDEFYVVHKKDNEDLNIGYIYQSMAELKKELEE
SLEDTQEYSNTEFLDATLADDGVNEIEATEDSPKPKKRPAESSPEEPVEKIKSEKKVKLD
RDPERKTEIQSCKSEESTKKTKADSSKSEQKTAQADTESGERCPGDKGPGAAVESKDGME
EVLVCIICQEIMHDCISLQPCMHTFCAGCYSDWMKRSPECPSCRMTVDRINRNHIVNNLI
EAYLKEHPDKKRSEEDIKELDAKNQISRDMLYPKELKDKEYDPDEEVEDSDDYEEDSDEA
DNQAPIPTPVFRPAPVPPFQYGGGLFGNWNPVRFVCRQCPNYHDPNTPGTGVLGTVFNTV
RTALGINQGNTQNTQGNNQGMTTTEGNQPGPSTADQPDIAGDDSEATQPTTSTEDDFEER
KKKDDIKPEVVAPQYVCVVNQNHILCQCCLQPMPDRRTLPETRQQCCLCLRSFCHAYWGC
KKAECLGCIGRFKDMNLGRKCLVNLILENPYESEILQNYLEEKKMTLNEMRDICMQKLDE
GTYKCIDQMRLNLTSERTVCYPCALRNFKDLAYTFRSDIKKEDLPEAVRRRNDCYWGKNC
RTQKNKPHHAQNFNHICEQTRTS
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggcatggggccagctggtcagtctgacggatgttgaatcagagcccgtgcta
attacttctgacagactgacaattggtcgagcaccagactgtgatatttcattcgctgga
aacaaacttgtgtcaggccatcattgtagtgtggagagagatgaagatggacaggtgtgg
ttacgagattccagtacaaatggaacactcctaaatttgaaagttaaagtcacgaaagga
aatgggaagaaattgagtcatggagatgaattttatgtggtccataagaaagataacgag
gatttaaacattggatacatttatcaaagcatggcagaactaaaaaaagaacttgaagaa
agtcttgaagacacacaggagtattctaacaccgaatttctggatgccactttggcagat
gatggtgtcaatgaaatagaagctacagaagactcacctaaaccaaagaaaaggccagca
gaatcatcaccagaagagccagtggaaaaaattaaaagtgaaaaaaaggtgaaattagat
agagatccagagagaaagacagaaattcagtcttgtaaatcagaggagtctacaaagaag
acaaaagcagattcctctaaatctgagcaaaagacagctcaggctgacacagaatcaggg
gaaaggtgcccaggggacaaaggcccaggggctgcagtggagtctaaggatggaatggag
gaagtgctggtgtgcatcatctgtcaggagatcatgcacgactgtatcagtttacagccc
tgtatgcatacattctgtgcgggctgttactcagactggatgaagcgatccccagagtgc
ccctcttgcagaatgacggtggatagaattaacaggaaccatatagtgaacaacctaatc
gaggcatatctgaaggaacacccagataaaaagagatcagaggaagacatcaaagaactt
gatgccaaaaatcaaataagcagagacatgttatacccgaaagagttgaaggacaaggaa
tatgaccctgatgaagaggtggaggattctgacgattatgaagaggactctgatgaggcg
gacaatcaagcacccatacctactcctgtgtttagacctgctccagtccctccttttcag
tatggtggtggactgtttggaaattggaaccctgtgagatttgtctgtcgtcagtgtccc
aattaccatgacccaaacacacctgggacaggtgttttaggaacagtttttaacactgtg
aggactgctctaggtatcaatcagggcaatactcaaaatacacagggcaataaccagggc
atgaccactacagaaggcaatcaaccggggccatccactgctgaccagccagacatcgca
ggagatgacagtgaggctacccagcccaccacctccacagaagatgattttgaagagagg
aagaagaaagatgacataaaaccagaggttgtagctccgcaatatgtctgtgtggtgaac
caaaaccacattctatgtcagtgttgtttacaaccaatgccggacagacggacattgcca
gagacgcgccagcagtgttgtctgtgtctaagatcattctgccatgcctactggggatgt
aaaaaagctgaatgtctgggttgcattggaagatttaaagacatgaatttaggaagaaag
tgcctcgtgaaccttattctggaaaatccttatgaatcagaaatcttacagaattacctt
gaagagaagaaaatgaccttgaatgagatgagagatatctgtatgcagaagttggatgag
ggaacatacaagtgcatagaccaaatgcgattgaatctgacatcagaaagaaccgtgtgt
tatccctgtgccttgaggaacttcaaggatttagcatacactttcagatcagatatcaag
aaagaagatttaccagaggctgtaaggagaagaaatgactgctattggggtaaaaactgc
aggactcagaaaaacaaacctcaccatgctcaaaattttaaccacatatgcgaacaaact
aggacatcatag
DBGET
integrated database retrieval system
