Magallana gigas (Pacific oyster): 105327163
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Entry
105327163 CDS
T03920
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
KO
K24738
rabconnectin-3b
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
105327163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105327163
Membrane trafficking [BR:
crg04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
105327163
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
EIF3I
WDR55
Beta-prop_EML
ASA1
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Beta-prop_WDR41
ANAPC4_WD40
Beta-prop_SCAP
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
PAC11
WD40_MABP1-WDR62_2nd
DSE1_N
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_ACSF4
Beta-prop_Aladin
TRM82_WD
Beta-prop_LRRK2
Beta-prop_IP5PC_F
WDR72_alpha-sol
Motif
Other DBs
NCBI-GeneID:
105327163
NCBI-ProteinID:
XP_034337638
LinkDB
All DBs
Position
3:26994868..27020827
Genome browser
AA seq
1503 aa
AA seq
DB search
MSTSSNLVVPVVLWGRRPPTHCIAAILMTPDQKNIITGCNDGQIGIWDVAENSQIYPRSM
LFGHTAAISCLALGSEKVDTPYIVSASENGEMCLWDISDGRCVENTKMPHIHTNMQAYHF
QVSKDVRLVCNGYYPEIFIINPNSLEILYTLSSKVAPDWISACCILHPVTKEGRSVCKDD
VVVAISNSGAVKVWTLTGSENMTQPVYENESKQIRCLNAQTLTCCPYNQRTVLIVCSKYW
QIYDAGDFTLLCSESNRCGERWSGGDFISVDKVIVWSNEGKGYLYKLPVSLLKGKVLESA
NAESIEYRKPSNQTSPHAYYILDMFSESSMACSPAMTFHVGKSDIPGRYLLRGDSEGQIV
MWTLPEVTERQMTLVRQESFDRLPALPPRCSTSLADIWENLHHPPAGIIDGLCDENNQPL
AITSTIYIPSQGKVACGRENGSIVIAPATQSIILQLLEVEEFKHKDVPIKILHGHHGRVT
SLLYPFNESTRYEPQHLLSGGADFSVMLWDIYTGCKLHTFTVHGGEITQLLCPPNNCNSR
ILPCVCSVASDHSVTLLSLRERKCIMLAGRHLFPVQTIKWRPLDDFMVVSCSDGTVYVWQ
METGHLDRVVHGITAEEILNNCDENATPMESLVNPNITLTQALKRRNLATFKNLAQQKLQ
IQSGTSHQASTHRSDFLKQQTYPMFIQGIRANLKDPDIHILFFDTESLIVQLLTEEYSTM
SPGELEAKGYLPYTDQSDHGGMHSMMFKMKEKADIVAGGQKSPSRSESSSHGGSPAHTSS
PSHKSVTYSDRSLTLDIAQLFLSCLHAWGLDPDLDKLCMNKLGLLQPRCPMSFGLISRTG
HMSLMLPGWHKLFCQEESTGKMPKEVMRTPAKVTLMQQARSASSGQFDKSVNLAQRHGLA
QSDYTDSDQDSDPGNKRVIPERRPTAVQDEMKAFSSKARWQISSAVTTNHLLSIISTANT
LMSMSHATFVTDKIKKKRNRSRKRYTGNLGLVVSESMDSPGTSDDETDAIMMQQSQIKQG
WSLKAALHCVLLPEMVGSEYLKAPQLEMLARRWQDRCLEIREAAQALLLAELRRIGPEGR
KEILDQWSPFLPTYVDPQLSLMNAESLQKNEEGDEDDEEEDPMINDIPLQKASSSFESRK
KQATAIVMLGVIGAEFGHEIEPSRRKLEELKKNKKSAQEGFTLQNYSLARHTSKALTFLL
QQPPSRKLPAYSPIRRAAIDLIGRGFTVWEPYVEVSAVLLGLLELCIDSDRLVPSMTYGL
PLTPIADACRTARHALSLIATARPPAFIITMAKEVARFNAIAQTAQAQHSQIINSVLVRG
KLEILKTVELLVEKMPSDVADHLVEAMDVTIHCLDINQLKTKGLQELFPTICRFSMVCMC
PVTKRIWVGAKNGGLAFYDLKQHSKCQMIQAHAGPVIAVSVSADGKFLVTYSHVDSRLKF
WQTASSSLFGIGSQQTKCVKQTATSPIPVTNLTNLLKLVRLVWVDTRSIVMLTVDGKEHK
YSV
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgtccactagcagtaacctagtggtaccagtggtactgtgggggaggagaccacccact
cactgtatagctgccatacttatgacacctgaccaaaagaacattataacaggatgtaat
gacggacagattggcatctgggatgttgctgaaaactcacagatctacccccgcagcatg
ttgtttggtcacacggcagccatcagctgtttagcactaggcagcgagaaagtagacact
ccgtacattgtgagtgcttcagagaatggagagatgtgcttatgggatattagtgatggg
agatgtgtagaaaacactaagatgccccacattcacaccaatatgcaggcctatcacttt
caagtgtccaaggatgtgcgtctggtgtgtaacggatactatccagaaattttcatcatc
aatcccaactctttggaaatcctatacacgctgtcatcaaaggtcgcccccgactggatc
agtgcatgctgtatcctccatcccgtcacaaaggagggccgatctgtctgtaaagatgat
gttgtggtagccatttctaattcaggagcagtcaaagtttggaccctcactggtagtgaa
aacatgacacagccagtgtatgaaaatgagtccaagcagatccgctgtttgaatgcgcag
actttaacctgctgtccttataatcagagaactgtcctgatagtctgctccaagtattgg
cagatttatgatgcaggagacttcaccttgctgtgttcagaatccaacaggtgtggagag
cggtggtcaggtggggacttcatcagcgtggacaaggtcatcgtctggagcaatgagggc
aaaggttacctgtacaagttacctgtcagtttgcttaagggaaaagtattggaaagtgcc
aatgctgaaagtattgagtaccgtaaaccttctaatcagacctcaccccatgcttattac
atcctagacatgttttcagagtcttctatggcttgctctcctgccatgacatttcacgtt
ggcaaaagtgacattccgggccggtacctgctccgtggagattctgagggccagattgtg
atgtggacacttcccgaggtcacagagaggcaaatgaccttggttcgccaagagagtttt
gatagattaccagctttgcctcctaggtgtagtacatccctggctgatatttgggagaat
ctgcatcacccaccagctggcatcatagatggactgtgtgatgagaataaccagccatta
gctattacttcgaccatttacataccatcccaaggaaaagtggcctgtgggagagagaat
gggtccatcgtgattgccccggcaacacagagcattatcttacagctgctggaagtagag
gagttcaaacacaaagatgttccaataaagattctacatggacatcatggccgtgtgacc
agtctgctgtacccgttcaatgagagcactcgctatgagccccagcacctactgtcgggc
ggggcagacttctccgtcatgctctgggatatctacactggctgtaaactccatactttc
actgtccatggaggggagataactcagttactgtgcccaccaaacaattgcaattctaga
attctgccatgtgtgtgttcagtggccagtgaccattcagtcaccctgctgagtctgagg
gagaggaagtgtataatgcttgcagggaggcacctgtttcctgtacagaccattaagtgg
cgaccactggacgacttcatggtagtcagctgctctgatggcactgtgtatgtctggcag
atggaaacaggtcacctggacagagttgtacatggaataacagcagaggaaattctaaat
aactgtgatgaaaatgctacgcccatggagagccttgttaacccaaatatcaccctcacc
caggcactcaaacgccgcaacctggcaacatttaaaaaccttgctcagcagaaattacag
attcagagtgggaccagccaccaagcatctacacacaggagtgacttcttgaaacaacag
acttatccaatgttcattcagggcatcagagccaatctgaaggacccagacatccacatt
ctgttttttgatacagagtccctgattgtccagctattgacagaagaatattccacaatg
tcaccgggagagttggaggccaagggatacctaccatacactgaccagtcagaccatggt
ggaatgcacagtatgatgtttaagatgaaggagaaggcagatattgtagctggaggacag
aagagtccctctcgctcggaatccagttcacatgggggatcccccgcccacacttcctcc
cccagccataaatctgttacctactcagacaggagcctaaccctggacattgctcagctc
ttcttgtcctgcctacacgcttggggcctggacccagaccttgataaactctgtatgaac
aagctgggattgttgcagcccaggtgcccaatgtcttttggactgatttcacgcacaggt
cacatgtctttgatgctacctggctggcacaagttgttctgccaggaggaatccacgggt
aaaatgccaaaagaggtgatgcgtacgcctgctaaagtcaccctgatgcagcaggctcgg
tcggcctctagtggtcagtttgacaaatctgtgaacctggcccagagacatggtctggct
cagtcagactacaccgatagcgaccaggacagtgaccctggcaacaagcgagtaatacca
gagagaaggcccaccgcagtacaggacgaaatgaaggcgttctcatcaaaggcccgttgg
cagatttccagtgctgtgacaaccaatcatttgctgtctattatctcaacagccaacact
ctaatgagtatgagtcatgctacctttgtaacagacaagataaagaaaaaaagaaatagg
agtagaaaaagatacacaggtaaccttgggttggtggtgtcggaatccatggacagtcca
ggaactagtgatgatgagacagacgccatcatgatgcagcagtcacagataaagcagggg
tggagtctgaaggcggcacttcactgcgtcttactgccagaaatggtggggtctgaatac
ctgaaggcgccccaacttgagatgttggccaggagatggcaggacaggtgtttggaaatc
cgtgaagctgcccaagctctgctgttggcagaactgagaagaatcggtcctgaggggagg
aaggagatactggaccaatggtctcccttcctgcccacctacgtagacccccagctcagc
ctgatgaatgccgagtctctgcagaagaacgaggaaggggatgaagatgacgaggaggaa
gatcccatgatcaatgatatcccccttcagaaagcttcatcatcatttgaaagtagaaag
aaacaagccacagccattgtgatgcttggagtgataggtgctgagtttggacacgagata
gagccaagtcgacggaagttagaggaactcaagaagaacaaaaagtcggctcaagaggga
ttcactcttcagaactattccttagccagacataccagtaaagctttgacattcctctta
caacaacctccaagcaggaaattacctgcatactctcccattcgtcgagctgcgattgat
ttgattggaagaggcttcacagtttgggaaccatatgtcgaagtttctgctgtattactt
ggactgttggagctttgtatagattctgatcgtctagtgccaagcatgacttatggtcta
cccctgacccctattgctgatgcttgtcgaacagccagacatgccctgtctctcattgcc
acggcccgacccccggcgtttatcatcaccatggccaaggaagtggcacgctttaatgcc
atcgcccagacagcgcaggctcagcactctcagataattaactccgtgctggtcaggggc
aagctagaaattctcaaaacggtggagctactggtggagaagatgcccagtgatgtcgct
gaccatttggtggaggcaatggatgtgactatacactgtttggacataaaccaactaaag
accaaaggactgcaggaacttttccccacaatatgtcgattcagcatggtgtgtatgtgt
ccagtcacaaagaggatctgggttggggccaagaatgggggcctggcattttatgatcta
aagcagcattccaagtgtcagatgattcaagctcatgcaggtccagtgattgccgtatct
gtgtcggcagacggaaagttcctggtgacatattcccatgttgacagtcgtctgaaattt
tggcagaccgcctcctcatctctgtttgggattggatcgcagcagacaaagtgtgtcaaa
caaactgccacctcgccgattcctgtcacaaacctgaccaacctgctgaagctggttcgc
ctggtgtgggtggacactcgctccattgtcatgctcaccgtcgacggcaaagagcacaag
tattcagtctga
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integrated database retrieval system
