KEGG   Magallana gigas (Pacific oyster): 105327336
Entry
105327336         CDS       T03920                                 
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07888  Ras-related protein Rab-5B
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg04137  Mitophagy - animal
crg04144  Endocytosis
crg04145  Phagosome
crg04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:crg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    105327336
   04145 Phagosome
    105327336
   04137 Mitophagy - animal
    105327336
   04148 Efferocytosis
    105327336
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crg04131]
    105327336
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:crg04147]
    105327336
   04031 GTP-binding proteins [BR:crg04031]
    105327336
Membrane trafficking [BR:crg04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    105327336
 Endosome - Lysosome transport
    105327336
Exosome [BR:crg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105327336
  Exosomal proteins of other body fluids (saliva and urine)
   105327336
  Exosomal proteins of colorectal cancer cells
   105327336
  Exosomal proteins of melanoma cells
   105327336
GTP-binding proteins [BR:crg04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    105327336
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 105327336
NCBI-ProteinID: XP_011426046
UniProt: K1R1Q8
LinkDB
Position
2:complement(58431210..58436714)
AA seq 213 aa
MAGRTGAQRPNGATQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKNWVKELQR
QASPNIVIALAGNKSDLAQKRMVEYEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKK
LPKNEGGGPAPSRPGGVNLNSQQTQQSEGGCCK
NT seq 642 nt   +upstreamnt  +downstreamnt
atggcaggccgaactggagcacagaggcccaatggagccacacagggaaaaatttgtcag
tttaaacttgtgttgttgggagagtcagctgttggaaagtcaagtttagtgttgcgtttt
gtaaaaggacaattccatgaataccaagaaagcacaattggagctgcatttttaacacag
acagtgtgtcttgatgatacaacagtgaaatttgagatctgggatactgctggccaggaa
cgataccacagtctagctcctatgtattacaggggggctcaggctgccatagtggtatac
gacattacaaatcaggacacatttggtagagcgaaaaactgggtcaaagagctccaaagg
caggctagtccaaacattgtgattgctctggctgggaacaaatcagatttggcacagaaa
agaatggttgaatatgaggaagcacaagcttatgcagaggaaaacagtttattattcatg
gaaacatcagcaaaaacagccatgaatgtcaacgatatatttttggcaatagctaaaaag
ttgcctaagaatgaaggaggaggaccagcaccctcacgaccagggggagtcaatttaaac
agccaacaaacacagcaatcagagggaggttgttgcaagtaa

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