Magallana gigas (Pacific oyster): 105327345
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Entry
105327345 CDS
T03920
Name
(RefSeq) nuclear receptor corepressor 1
KO
K04650
nuclear receptor co-repressor 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105327345
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crg01009
]
105327345
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crg03036
]
105327345
Protein phosphatases and associated proteins [BR:
crg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105327345
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
105327345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
GPS2_interact
NCOR1_N
Myb_DNA-bind_6
Myb_DNA-bind_7
DUF7952
Motif
Other DBs
NCBI-GeneID:
105327345
NCBI-ProteinID:
XP_011426580
LinkDB
All DBs
Position
3
Genome browser
AA seq
2630 aa
AA seq
DB search
MFNNSEFPMQPMQHPQVQQQQHMVQSLHIAPALTAQSGGQQLNTAAACVQLSQQQQWNAQ
VFQNALHATAFWRRFRGPPGNPHDVPSPYKRPRPQSPVQQRPGYPYAQDPQSHRAYPGVP
VTASVYPMYRQEYQGSADQAGRDRYREEYHLIPHRRPTLLHDYQAHRANIDRYRSREAYA
GYAQDTMGNIQVSQGGGDPGPSTSQVNQASTGPHTPKRPRLGMERPELQPLQIDVKKEPT
YNPQVEAISPTLPPDETSPSSKDQLLQAISKVDREISKVDKDIQKLKKKQEQLELEKCKP
PEEKQKVKDIVVTETKHQSIAQIIYAENRKKAEEAHNMFAKLGPKIDLPLYNQPSDTTVY
HENKRKYAEFKPRLLLHFKKRQQEKRIRERYLTERYDQLMQVWLKKIERIENNAKRKAKD
AKTREYFEKVFPEIKKNREDKERFSRAGTRAGNNGVYVRSEAELEQIMDGIHEQEEEDKK
MRSYAVVPPMMLDARQRKLRYTNNNGRVEDPMAEDEERKFINVWTPQEKNIFKEKYLQHP
KNFSYIAQFLERKSVADCVQYYYQTKKTENYKQLLRKQTVRKQKWKKPQQQTSSRLQDDS
NKERGAGGEDEAVSSATSEQAMETSDNCAQASSSSEADLKIKEEEFSSDDNEAMAAVTAG
SEGDGGAHNCAICDVHLEHYGLSRPLTQSNCDLYGMKEENLKPDMRVCSSCRCKSVRRRY
TQCPVPLCKTPKRKVKRLRPLPPKWSELSAEAKDPIIKELQLTDDITKCCSACFNRIARR
LGTGSGAGDQVAPMAPETTDTTGILKSVETSRWTEEEMEIAKQGLRLHGRDWAAIASMVP
TKTEAQCKNFYFNYKKKLNLEQIVQEHAKEKVLNSQEVDKRTTSVCESIASTVTATSDVE
DMSSGMEDNDEDNDSDTTSAPSPTAQRMEEGPMKEDKQEGNTVPELPDHQSTAPVGFPQN
LTSNKPLSASQGSLRSVDNDSSATMSADEAHPSDSHTHREQQSEPRDSFSPRTSGIPASK
LPMQHPGFGNFPLQPPQTSQAHVQQVIQGTQLGVPNQPRPSTSPGLQMKSASHAHPSPIR
QSPVPSMVGSSPALEMDHNRPSRPSSRDIREVQQGMGQANSSVLDFSGRQMSQNQQQGRN
NIYSMMYQGENSQHRPSSAMSEPGFVNQGHLSRSMSPIVPGNKNSQNDAKRMSCVRDLIH
SAIERNLVQSDRPAERPPEKRPASSEPVYRGQPMIPGMNQYNVQDLRKEKPEYGGRHSVS
PYHMPVGRMEREVPDSRDRDLPQDLSKAPQGYRGNPRDFGSQPQFEYRRPAEDPLPRSSG
PPPAHSQKPSGYYHNEALPLTNRPPSVEQKSPQPSFQHDRQAISPAINRHIPPSTSPYPG
MPTVMDPHGRGQPRQTIPPPPPLINNKGPSPKLNTKSPPSSGHPSMLMPPGSVMHSPSGS
ITQGTPVRTMAQSLNPNQVASMVQRQEAIHRPVQPRMPSGSITSGTPVNRDMGNRGPPSG
MEGPRMQQLQWEQQRMMMEQHMTRPQQYPQPGMPFPYQSENSTRQTIRCDFETSRQMGGP
HNRKQESQSSPRGKEGKPGAYPGSMMPGYPQSNQGLVYLQPSMPQDRRLSPHPSHNAPPH
EEKPIGWPKQGMAGPVPGQVPHDRPSITHGTGRPSVITVNDRPEYPNEGMRGGQGASSPR
YDSMLQRQQQQQQQRTSIPAATLAAQQQEYNRRQMQEKQEQQERENANKVKAFNLEEQIR
REIMESPKQEERLHKIDTDSSRSTSNRSSPGYRQQNISTPAEFFKVFAQDQSGTNRSGSE
RQSSLTAANLIDAIIIHQINSSTEETATSKTETSPMNSMVSSASRPKQEPPDSAPQAGPH
SLQPDQKSPPAMHGKKRWVHESQQRPAQSSPMPSTPQSGSGQVSDSDNSPTTSSMDAQTP
KSEGSSADQKNSMTLGEHITSIIMMDYSNGKPSLKNNVLSQINGSPEDSPSVSNSGTPVT
AVPDQSSPGKPLTSQSQTDGVSQSTDSRPRSFSTGAGFVPSVHGHKWKKAHMHQDTSNVG
SRSSSGSGEMYPDSMTSHTGEGDRGQQPDQSRSPLICSGTEPVSPAGAPESSEALPAMTS
PPPSPRSRSGSLNISSSVAANHQHISSLLSRPNTAGGHQAECSVSSPQVSEVASSSKPDN
SQLGSLSPLDYVKNKIAEVLRDEYDPKAQSGASTMHQRSLQQKMAQQSGPSHLQSSSVGI
NRSISPMTGGHHQQAEPESTQQRGWDNQQREMHSQQHGDSMASLQQHQHETFPSSTSSNE
QLQYQDPNNKHLSSSDEVSDSSSTSSQPVSQISAAHAKKRMFARGRVKYGPDDAQSKYSQ
PKSLPSSMSEVQRASTTTDKKGPRSEYDFPDSPDDDPVVKGSYMALSSTTRSPRRGIVDS
SDSRTERGGDSQVQSSDSRFGMDHSEAQSSEAQSYMRPDQNIDSRFMRRSSKHDTSEVDE
SSNVSHPSIDSTHSDRMIIDESGGAIDSSSVADVTSASPQRDRSKSSRSSKDSENSPRSS
TDVQDGGERMAQSRTPDSAVGSFTHRSRSPRVGESHFPLLDTTTHPHSSSEMPTSASNIP
TSTSSASMPSPYSGAGQQVGSSDGDHGFQQRGHEPTLLLSAQYETLSDDD
NT seq
7893 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaattccgagtttcccatgcagccaatgcagcatcctcaggtacagcagcag
cagcacatggtgcaatcactgcacattgcgcctgccttgacagcacagtctggtgggcag
caactgaacactgccgctgcttgtgtgcaactttcacagcagcaacaatggaatgctcaa
gtttttcagaatgctctccatgccactgcattttggagaaggtttagagggccaccagga
aacccccacgatgtgccctccccgtacaagagacctcgcccccagagccctgtacagcag
agacctggatatccatatgcccaggacccccagagccacagggcctaccctggggtcccg
gtgactgcctctgtttatcctatgtacaggcaggaataccagggatcggctgaccaggcg
ggcagggaccgctacagagaggagtaccacctgattccccaccgacgccccaccctgctc
catgactaccaggcacacagagccaatatagacagatacagaagtagggaagcttatgct
ggatatgctcaggacacaatgggaaatattcaggtatcccaagggggtggagatccaggt
cccagtacaagccaggtcaaccaagcctctactggtcctcacacccccaaacgccctcgc
ctggggatggaaagaccagagttacagcccctgcagatagacgtgaaaaaggaaccaacc
tacaatccgcaagtggaggcaatatcgcccaccctccctcccgatgagaccagtccctcc
tccaaggatcagcttcttcaggccatcagtaaagtggatagagagatcagcaaggtcgac
aaagacattcagaaactcaaaaagaaacaggagcagctagagttagagaaatgtaaacca
ccagaagagaaacagaaagtaaaggatattgttgtcacggagaccaaacatcagagcata
gctcaaatcatttatgctgagaacaggaaaaaagcagaggaagcacacaacatgtttgct
aaactagggccgaagatagatctgcctctgtataaccagccctcagacaccactgtttac
catgagaacaaaagaaagtatgccgagttcaaacctaggctccttctgcatttcaaaaag
agacagcaggagaagagaataagggagaggtatctaacagaaagatatgatcagttgatg
caagtttggttgaaaaagatcgaaagaattgagaacaatgctaaaagaaaagccaaagat
gccaaaacaagggagtactttgagaaggtattcccagagatcaagaagaacagggaggat
aaagagaggttttccagggctgggactcgtgctgggaacaatggggtgtatgtgaggagt
gaggccgagctggagcagattatggatggaattcatgaacaagaggaggaagacaaaaag
atgaggagctatgcagtggttccccctatgatgttggatgctcggcaacgcaaattacga
tacacaaacaataatgggcgtgtagaagatccaatggctgaggatgaggagaggaagttc
ataaatgtgtggacaccacaggaaaagaacatcttcaaggagaaatatttacagcatccc
aaaaacttctcttacattgctcagtttctggagagaaagagtgtagcagactgtgtccag
tactactatcaaaccaagaaaacagaaaattacaaacagcttctacgtaaacagacagta
cgaaaacagaagtggaagaagcctcagcagcaaacatcctcacgccttcaggatgactct
aacaaggagcgaggtgctggtggtgaagatgaggcagtctcctcggccacctcagagcag
gcaatggaaacctcagataactgtgcacaagcctcctcctcaagtgaggcagacctcaag
atcaaagaggaagaattctcatcagatgacaacgaggcaatggcagcagtcactgcaggg
agtgaaggggatgggggtgcccataactgtgcaatctgcgatgtgcatctagagcactat
ggtctgagtcgacctttgacacaaagtaattgtgacctgtacggtatgaaggaagaaaac
ctgaagcctgacatgagagtgtgcagcagttgtcgctgtaaatctgtgaggcgcagatac
acacaatgcccagtacctttatgtaaaactccaaagagaaaggtcaagcgactccgaccc
ctgccccctaaatggtcagagttatcagctgaggctaaagacccaatcatcaaggaactt
cagcttactgatgacattacaaagtgctgctctgcctgttttaaccggatagcgaggaga
ctggggacgggatctggggccggggaccaggtggcaccgatggcccccgagaccacagac
accacaggtattctaaagagtgtagagacatctcggtggactgaagaggaaatggagata
gcaaaacaaggactgaggcttcatggcagagactgggcagccatagcaagcatggtacct
actaagacagaggcacagtgcaaaaatttctactttaactacaagaagaaactgaatctg
gagcagattgttcaggaacatgccaaagaaaaggttttaaattcccaagaagtagacaaa
aggaccacctctgtgtgtgagagtattgcttccacggttacagcgacctcagatgtggaa
gacatgtcctcaggaatggaggacaatgatgaggataatgactctgacacaaccagtgct
cctagccccactgctcaaaggatggaggaaggtccaatgaaagaggacaaacaagaaggg
aacaccgtacctgaactaccggatcaccagagcactgccccagtgggattcccccagaac
ctgacctctaacaagcctctgagtgcctcccagggcagcctccgcagtgtggacaatgac
agcagtgccacaatgagtgctgatgaagcccatccctcagacagccacacccacagggaa
cagcagagtgagccaagagattcatttagtcctagaacatctggaatccctgcctctaag
ttgccaatgcagcatccaggttttggtaactttccactgcaacctcctcaaacaagtcag
gcccacgtacagcaagtgattcaaggcacccagttaggtgtaccgaatcaaccccggcct
tccacaagccctgggttacagatgaagagtgcttcacatgcccatccatcacccatcagg
cagagcccagtgcccagtatggtgggctcaagtccggccctggagatggatcacaatcgc
ccatctcgcccatcaagtcgtgacatcagggaggtccagcaaggaatgggacaggcaaac
tcctcagtactggatttctcaggtagacagatgtcacaaaaccaacagcagggcaggaac
aacatatatagtatgatgtatcaaggagagaatagtcaacacagaccttctagtgctatg
tcagagccaggatttgtcaaccaaggccatctgagtaggagcatgtcaccaattgtacca
ggcaacaagaacagtcagaatgatgccaaaagaatgtcctgtgtccgtgacctcattcat
tcagcgatagagaggaatctggttcagtcggatcgacctgcagagagaccccctgaaaaa
cggcctgcatcctcagagccagtttatagaggtcaaccaatgattcctggaatgaatcag
tacaatgttcaggatcttaggaaagagaagccagagtatggtgggcggcactcagtttct
ccttatcacatgcctgtgggcagaatggagagggaggtacctgacagcagggacagagat
ctccctcaggacctatctaaagctccccaaggttacaggggaaatcccagggattttgga
agccagcctcagtttgaatatagaagacctgcagaggatccgttgcctaggtcttctggt
cctccacctgctcactctcaaaaaccaagtggatattatcacaatgaggctctgccacta
actaacagacctccatctgtggagcagaagtccccacagccttccttccagcatgacaga
caggcgatatcaccagccattaataggcacatcccaccaagtacatctccttaccctgga
atgcccacagtaatggacccccatggccgtggacaacctaggcaaaccattcctccaccc
ccgccattaatcaacaacaagggaccttcccccaagctgaacacaaaatcccctccatca
agtggccatccctccatgctcatgcccccaggttcagttatgcattcaccttcaggatca
ataactcagggtactcctgtgagaactatggctcagagtttgaatccaaatcaggtagca
agtatggtacagcgtcaggaggctattcacagacctgtacagccaaggatgcctagtggc
tcaataactagtggcacgcctgtcaatagagatatggggaaccgagggcctccaagtgga
atggaggggcctaggatgcagcagttacaatgggagcaacagagaatgatgatggagcag
cacatgaccagaccacagcaatatccccagccaggaatgccatttccttaccagtcagag
aacagcaccagacaaacaatcagatgtgactttgaaacttctaggcagatgggaggaccg
cacaacagaaaacaagagagccaatcctcacctagaggaaaagagggaaagccaggggct
tacccaggatccatgatgccaggctatcctcagagtaaccagggattagtgtatcttcaa
ccttccatgccacaagataggagattgtcaccacacccatcacataatgctccaccacat
gaggagaaacctattggatggcctaaacagggaatggctggaccagttcctggtcaagtt
cctcacgatcgaccaagcataacacatggcacaggccgtcccagtgtcatcactgtgaat
gatcgcccagagtacccaaacgagggtatgagaggtggacagggtgcaagctccccaaga
tatgactcaatgttacaaagacaacagcagcaacaacagcaaagaacaagcataccagct
gctacacttgcagcacagcaacaggagtacaacagaagacagatgcaagaaaaacaagaa
caacaagaaagggagaatgcaaacaaagtcaaggctttcaatttggaagagcagattaga
agagagataatggagtcccccaaacaagaggaaaggctacacaaaatcgatacagattcc
agcagatccacatcaaaccgatcttccccaggatacaggcaacagaacatctcaactcca
gcagagttcttcaaagtctttgcccaagatcaaagtggaacaaaccgctcaggtagtgag
agacagtcttccttaaccgctgccaatctgattgatgctattattattcatcagattaat
agttctacagaagagacagcgacttccaaaacagagacatctcctatgaactctatggtc
tcctctgcttctcgtcccaaacaggagccaccagactcagctccacaagcaggaccacat
tctttgcagcctgaccaaaagtcaccaccagccatgcatgggaagaagagatgggtacat
gaatctcagcagaggcctgctcagtcttctccaatgccaagcactcctcagagtggatca
ggacaggtatcagacagtgacaatagtccaacaacatccagcatggatgcccagacaccc
aaatctgaaggatcaagtgctgaccagaagaatagcatgaccctgggggaacacatcacc
tccatcataatgatggactatagcaacggcaagccctccctcaaaaacaacgttctcagt
cagattaatggcagtccagaagactctccctctgtcagtaattcgggaaccccagtcact
gcagtgcctgaccagtcgtccccagggaaacccctgacgtcccagagtcagactgatggg
gtgtcccaatccactgactctcgcccccgaagcttctccacaggagcaggatttgtaccc
tctgtccatggccacaaatggaagaaagcccacatgcatcaggacaccagtaatgtggga
tccagaagttcatctggatctggagaaatgtacccagacagcatgacctctcacacggga
gaaggggataggggtcaacagccggaccaatcccgctccccactcatctgtagtggcact
gaaccagtgtcccccgcaggagccccagagagtagcgaggcactgcctgccatgacttct
ccccctccctcgcctcgctcacgatctggttcactgaacatttcctcaagtgtagccgca
aatcaccaacatatttccagtctcttgtctagacccaacactgctggtggccaccaagcg
gagtgttccgtctcctccccacaagtgtcagaagtggcctccagctccaagcctgacaac
agccagctgggcagcctgtccccgctggactacgttaagaacaagattgctgaagttctc
cgggatgagtacgatcccaaggcacaatctggtgcgtctaccatgcatcagagaagcctt
caacagaaaatggcacagcaatcaggacccagtcacctacagagttccagtgtaggaatc
aatcgttccatctctccaatgacagggggtcaccaccaacaggcagagccagagtccacc
cagcagaggggctgggataatcaacagagagagatgcactcacagcaacatggagacagc
atggcatctttacagcaacaccagcatgagacttttccttcaagtacttcctccaatgag
cagctgcaatatcaggacccaaacaacaaacaccttagttcaagtgatgaagtgagtgat
agctccagcacttcatcccaacctgtatctcagatttcagcggcacatgctaagaaacgc
atgtttgcacgtggaagagtcaagtatgggcctgatgatgctcagagcaaatactcccag
ccaaaatcgttaccatcatctatgtctgaagttcagagggcatctaccacaacagacaag
aaaggtccacgatctgaatacgacttcccagatagtccggatgatgaccctgtggtgaaa
ggaagctacatggctctgtcaagtacaaccagaagccctcgccgtggaatagttgatagt
tctgacagtcgtacagaacgaggaggtgactcgcaagtccaaagttcagactcaagattt
ggaatggaccatagcgaagcccagagctcagaagctcagtcttacatgcgaccagatcaa
aacattgacagtcgcttcatgagacgctcatccaaacacgatacatcagaagtggatgaa
agttctaatgtgtctcatccaagcatagacagtacacactcagacagaatgatcattgat
gaatcagggggtgctatagatagttcatcggtagctgacgtaacctccgcatcaccccaa
agggacaggtcaaaatcttcaaggtcatccaaagacagtgagaacagccctcgcagtagt
acggatgttcaagacggaggagaacgcatggctcaaagtcgtacaccagacagtgccgta
gggtcatttacacaccgatctcgatccccgagggtaggcgagtcacacttccctcttcta
gacaccaccacacacccacactctagctccgaaatgccaacgtctgcatctaacatccct
acaagcacctcctctgcctcaatgccttctccatactctggggccgggcagcaggtgggg
tccagtgatggagaccatgggttccagcagagggggcacgagcccaccctccttctgtcc
gcacaatacgagacactgtctgacgacgattga
DBGET
integrated database retrieval system
