Magallana gigas (Pacific oyster): 105327705
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Entry
105327705 CDS
T03920
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crg03009
]
105327705
Enzymes [BR:
crg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
105327705
Ribosome biogenesis [BR:
crg03009
]
Eukaryotic type
Other ribosome biogenesis factors
105327705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_fdxn-like
NSUN5_N
FtsJ
Methyltransf_31
RsmF-B_ferredox
Methyltransf_25
GCD14
Motif
Other DBs
NCBI-GeneID:
105327705
NCBI-ProteinID:
XP_011426620
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Position
10:complement(13958224..13973734)
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AA seq
599 aa
AA seq
DB search
MGDMNRNSNLYIEAARVLHDIYEKKGSIKTCVHRSSYQEKQMLTALVSQTLRFAKVLETV
VKRTKLLENNRLLWNDGMLARVLLYDFMIGPGLYKPGRLKVVMVKNKEIITSEFDRLLTA
YGVNECSELPSSTTEALPRYVRVNLIKTSVDEVINSFVDKGWTLLHVPTDFSSFKEVCQN
LDENQFLRDFHLDDLLVFPAHTDFHDSRLVQDGRVILQDKASCLPAHILSPPEGAVVVDS
CAAPGNKTSHMASLMGNKGTIYAFDHKEDRIEVLQERMEGAGVSCKVARCMDFLRVKTDS
QTYRDVEYVMVDPSCSGSGIVSRLDSLTNDDASVSQHRLGQLHKLQAQILRHAFSFPKVK
KIVYSTCSINEEENEQVCEEIYEKFKERFKIKKVMKNWPERGREGYQKSDRYLRASPTAT
LTNGFFVACFKRRKMKQEVGSMESGMDQEEVSSEDDQGSQKQNGMDDEEKEGSKKRKKRK
EKQSSEEGGEELMEINEKKEKKKKSKKRKRDMYEEETPVKRKEEDKGKEKEEEEEKEEEV
LERSVKKRKERTSKSSHCSDTNDIRDKSEKMDAEESIASVGTENSTAEKHKKKKKRSKD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatatgaacagaaattctaatctctacatagaagcagcgagagttttacacgat
atatatgagaaaaaaggatcaatcaaaacctgcgtacacagatcttcctatcaggagaaa
cagatgttaacagctttggtcagtcagaccttgaggtttgcgaaagttttggaaacggtt
gtgaagcggacgaaacttctggagaacaacaggctactttggaatgatgggatgctggcc
agagttctactgtacgatttcatgattgggccaggtctttacaaaccaggaaggttaaag
gtggtgatggtgaaaaacaaggagataattaccagcgaatttgaccgacttctgactgcg
tatggagtaaatgagtgctcagagctgccaagttcaacaacagaggccctgcctcgttat
gtcagagttaacctgatcaaaacttccgtggacgaagtcattaattcttttgtggacaag
ggatggacattgcttcatgtaccgacagatttttccagcttcaaagaggtttgccaaaat
ttggatgagaaccagtttttgagggatttccatcttgacgacctgctagttttccctgca
cacacagattttcatgactcaagacttgtccaggacggcagagtcattctgcaagataag
gccagttgtctccccgctcatattttgtcacctccagagggagctgtggttgtagacagc
tgtgctgcccccggcaacaagacaagtcacatggccagtttaatgggaaacaaaggtaca
atctatgcctttgaccacaaggaggacaggatagaagttctacaagagcggatggaggga
gcaggagtcagctgtaaagtggcccgctgtatggacttcctgagggtcaagacggacagc
cagacctacagagatgtggagtacgtaatggtggacccgtcctgtagcggctcaggtata
gtaagccggttggacagcctgacgaatgacgatgcgtctgtctcacagcaccgtcttggc
caactccacaagctgcaggcccagattttacggcatgccttctcctttccaaaggttaaa
aagattgtgtattccacgtgttccatcaacgaggaagaaaatgagcaagtctgtgaggaa
atctacgaaaagttcaaagagagattcaagataaaaaaggttatgaaaaactggccagaa
agggggagggagggctaccagaaaagtgaccgttatttacgagcaagtccgaccgcaaca
ctgaccaacggtttctttgtcgcctgcttcaaacgaaggaaaatgaaacaggaagtgggc
agcatggaaagtggaatggatcaggaagaagtaagttcggaagacgatcaaggaagtcag
aagcagaatggaatggatgatgaggaaaaggaaggttcgaagaaaaggaaaaaacggaaa
gaaaaacaatccagcgaggaaggaggtgaagaattgatggaaataaatgagaagaaggaa
aagaagaagaagagcaagaagagaaagagagatatgtatgaagaagaaacaccagtcaaa
aggaaagaagaagataaggggaaggagaaagaagaagaagaagaaaaagaagaagaggta
ctggaaagatctgtaaaaaagagaaaagaaagaacatccaagagcagccattgttcagat
acaaatgacattagagacaaatcagaaaaaatggacgcggaagaaagtattgcgagtgtt
ggtacagagaatagcactgctgaaaaacacaaaaagaagaagaaacgctcaaaagactaa
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