Magallana gigas (Pacific oyster): 105327745
Help
Entry
105327745 CDS
T03920
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105327745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105327745
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105327745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105327745
NCBI-ProteinID:
XP_011426662
LinkDB
All DBs
Position
2:10721170..10731674
Genome browser
AA seq
284 aa
AA seq
DB search
MQEEFGITTKMAEDFRTARPKEYYRKFLEQEVRPDGRELGETRTTVINVGCLSTANGSAL
VKMGNTTVMCGIKAECAKPKTEEPAHGFIVPNVELSPMCSPQFRPGMPGEQARVLSQFML
EVMKNSNCIDVKKLCIEPGRLVWTLYCDIVCLDYGGNVTDACVLSLLAALNNTVLPNVVL
NKDTDKFEAFPDQSTTLQLQSSPVSSTFAIFDDEILFVDPTAEEENLATGQLTIVTTDDK
LCMVHKPGGTPLTDQQLCLCIKQAFERTKEVLRLIDDTISSVER
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagagtttggtataacaacaaagatggcggaagatttcagaactgcaagacca
aaagaatattatcgaaaatttttggaacaagaagttcgaccagatgggagagagctgggg
gagacacgtacaacagtcatcaatgtcggatgtttgtccactgctaatggatcagcactg
gtaaaaatgggaaatacaacagtaatgtgtggaatcaaagctgaatgtgcaaaaccaaaa
acagaagaacctgcacatggattcattgttccaaatgtagagttgtcccccatgtgttca
ccacagtttcgcccgggaatgccaggagaacaggcccgagtgctgagtcagtttatgctg
gaagtcatgaaaaactcaaattgcattgatgtcaagaaattgtgtattgaacctggcaga
ttggtgtggaccttgtattgtgacatagtgtgcctggactatggtggaaatgtcacagat
gcctgtgttttgtcattgctggcagccctcaataatactgttttaccaaatgtggtattg
aataaagacacagacaaatttgaagcttttcctgatcagtccacaacattacagctgcag
tctagtccagtgtcttccacattcgcaatatttgatgatgaaattttgtttgttgaccca
acagctgaggaagaaaacctggcaacaggccaacttacaatagttacaacagatgataaa
ctgtgtatggtccataagccgggtggtacccctcttacagaccagcagctgtgtttgtgt
attaaacaagcctttgaaagaacaaaagaagttttaagacttattgatgatacaatatca
agtgttgagaggtag
DBGET
integrated database retrieval system
