Magallana gigas (Pacific oyster): 105327826
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Entry
105327826 CDS
T03920
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105327826
Membrane trafficking [BR:
crg04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
105327826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
105327826
NCBI-ProteinID:
XP_011426756
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All DBs
Position
3:48006066..48048320
Genome browser
AA seq
1691 aa
AA seq
DB search
MEPVNPVAPPRKKRTSQVVEYGYRSSKNASTVMVESSSEKQPKPRKSVSSSVFDLDAFSD
SIREVLGKNVTLYQKFLLKQEVRPDKFEKRVIGLTGCRVFVFLAKTPTKVDQDFSFIDIQ
GLESKKKNQLTITVADGKPVSVVTVEPDLDDIDHIITHIGRSLKNVFPFYDIERFIKKID
VQPPDRLRLMQDMMKEIEKKEHGPCGGYSIMYACMCDYHNTPYREEVAWDVDTIYLSQDS
RELNLQDFDHLSSKDLVPIIGALENNTWFTKFTASKIKLTSDAQTEILKVMKRNNTLEEL
DLSSTGIAVDFVQKLATAILSNSSSQLQRIDLSKNSLDDKAMVHFIGSLKNLSKGLLHLD
ISNTRILGKGVNKVAECLSQSPAIVQSLNSLNLADNPSKGEDIQGLYNFLAQGNNITYLD
LSGIDCALELLCAALLRGSCASLTHLKVARNVFTHKKTKEVIVQGTWKTFFSSVYGLELL
DLSGCKLPPEALKELLLGIACNMHIKNLHLDLSSNDLQAQGGQVLGGCIGNISSITSLDI
SNNNFNQSIVSLLDSIKNNRSIKSLAIGQNFDNVKPKLMTGVMESIVNLIQDESSCIESL
SLADSRLRNNLSDIINALGSNVTLTEIDISGNQIGDFGARMLSKALQINSKLRCILWDKN
LISVQGFEDIAQALQKNYAMRKMPMPINDAVAALQKQGERTEIALQKIESLLQRNHSPQK
FSSDQAYRLQQGFLISSTQQMVDRLVVQVQDAVKALSMGDTAPFQSDIDQASSVVKDADN
SKQLLPHLQHIAMKSLNTGNMVETELKDLTDNLKTTLQAQIKKTVADMIECTGNQCSGVT
SDKDFMLELVSGCSERSSLPKGFAKHLMDGVETDVYNKLSEINLAVAAYISDTVIDGVIE
TLTDNHKILMSHVKQKRSESRPVSTDSREKELEKTEEVDKVPLRITIKADSPGASSKSSH
DNLEVPENSYIAYTVPYLQTLPYVRSTPNLSNKRKSVNARKMRPPTVIDPEQVNQALKIH
QAKEIDLDDSKVSDDGEVKDTETAKEVGSQEDLTKLSTSNAEKVELDSLGSLPDTSTKLT
HIAKSRPRGPQRRRPSARPQEAAQDTGAGLKADEGLDSFFTSSPADQGTPKSSKSDRKES
IGKGSDKKEPPPKPTSEKPKKGGLFKRNTGKDAKEQSDEKHDKSKGGFASKLFGKKNSDK
KEKTPQKSETPAKVEEPNREEQGEDSEPEPETKPAPENSTPDTIPEKEDVKSEQEAEEAA
PTEEKKEEAPRRKLPVGGIGIMGGPMNMNIFSEMKSNKRFSTLNADKEERKPAVALLPPG
RKSPTANIPPPFKEPAKESPLKPVEETKSEEELKVKEKTKLEDKPKVKEETKSEEKPKEK
DETKLEEKPKVKEETKSEEKPKVKEESKSEEKPKVKEEPKLEEKSKVKEEPKSSKEPKVE
KPVKEETKEEVASSEVKDTTVEDKSDQKEDKESKTAAQESKQSPAAMIGNILSKPRPSPS
PRSGLRRTPEDTASTPSTASPRSSRTSGDISKPLPLRPKPPPKAPKPSNKSRKSDPESTE
KGVSRESLESKESAADSRKEAHSTQSDDSGVVVDSATLRLSVGEKIKRLSQRLPEPENPP
ASSKSSSLPKNVSLKSSLKSEVQENGDSEKSGDKQEKSEEENSDSSKRTSDSDKSESLGE
GAIENVDEIMV
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgttaatcctgttgctccacctagaaagaagagaacatcacaagttgttgag
tatgggtatcgttcgtctaagaatgcatctaccgttatggttgaaagttcaagtgaaaaa
cagcccaaacctcgtaaatctgtgtcttcatcagtgtttgacttggatgcattttcagat
agcatcagggaggttctgggcaagaatgtgaccctgtatcagaagtttttactgaaacag
gaagtaaggccggacaagtttgaaaagcgggtcataggtctgacaggatgcagagttttt
gttttcctcgccaagacccctacaaaggtggaccaagatttcagctttatagatattcaa
ggcttagagagcaaaaagaaaaaccagctaacaatcactgtggcagatggcaagccagtc
tctgtggtgacagtagaaccagacttggatgacattgatcacataataacacacattggg
aggtctctcaaaaacgtatttcccttctatgatatcgagagatttatcaagaaaatcgat
gtgcagccacctgatcgtctacggctgatgcaagacatgatgaaagagattgagaagaaa
gagcatggaccgtgtggggggtactccattatgtacgcctgtatgtgtgactaccacaac
accccctacagggaggaggtggcctgggatgtagataccatttatttgtcccaagattcc
agagaacttaatctgcaagattttgatcatttgagttcaaaggacctagttccaatcata
ggggctttggaaaacaacacttggtttactaaattcacagccagcaaaatcaaattgaca
tcagatgcccagactgaaatcctgaaagtgatgaagaggaataacacgttagaggaactg
gacctcagcagtacaggaattgctgtagattttgtgcagaaattagcaacagccattttg
tccaatagttcatcacagctacagagaattgacttgtcaaagaactctttagatgacaaa
gcaatggtacacttcattggatcactgaagaacctatccaagggacttttacacctggat
atatccaacacaaggatcctcgggaaaggtgtcaacaaggtcgctgagtgtctgtcacaa
agccccgccattgtccagtcgctaaactcactcaacctggcagacaatcccagcaaggga
gaggacatccagggtctctacaacttcctggcccagggaaacaatataacctacctagat
ctctcagggatagactgtgccctggaactgctctgtgcagccctgctaagaggaagctgt
gcttctctgactcatctcaaagttgccagaaacgtattcactcacaaaaagaccaaagag
gtgattgtgcaggggacatggaagacatttttctccagtgtttacggcctggaactgttg
gatttgtctggctgtaaactacccccagaggccctcaaggagttacttttgggaattgcc
tgtaatatgcacatcaagaatcttcaccttgacctgagtagcaatgaccttcaggcacaa
ggaggacaggtgttggggggttgtattggaaacatcagtagtatcacaagtctggatatc
agtaataacaatttcaaccaatcaattgtgagtttacttgatagtataaagaacaacaga
agtataaagtctcttgccattggtcaaaactttgataatgtaaaaccaaaattgatgact
ggtgtgatggaaagtatcgtcaacttgattcaagacgaatcctcgtgtatcgagtctctg
tcattagccgattccagactgcggaacaatctctcagatatcataaacgcattgggcagc
aatgtgactctaacagaaatagacataagtggaaatcagatcggtgattttggtgccaga
atgctgagtaaggccctccaaattaactccaagctgcgctgcattctgtgggacaaaaac
ttgatttccgtgcaaggatttgaagacatagctcaggctctacaaaaaaattatgccatg
agaaaaatgcccatgccaataaatgatgctgtagcagcccttcaaaaacaaggggagaga
actgagattgcactacagaagatagaaagtttgctccaaaggaatcacagtccacagaaa
ttttcctctgaccaggcgtacaggcttcaacagggcttcctgatcagctccacccaacag
atggtggaccgtctagtggtacaggttcaggatgcggtcaaagctctgtccatgggggat
acagcccctttccagtctgacattgaccaggccagcagtgtcgtcaaggatgccgataat
tctaaacagttactgcctcacctacagcatatagccatgaaatccttgaatacagggaat
atggtggaaactgagcttaaggatctcactgataaccttaaaacaacccttcaggcccag
attaagaaaactgtagctgacatgattgaatgtacaggaaaccagtgctcaggggtcact
tcagacaaggattttatgttagaattggtatcaggatgttcagagagaagttctctaccc
aaaggatttgctaaacacctgatggatggagtggaaactgatgtatacaacaaactaagt
gagattaatttagccgtggcagcctacatctccgacacagtgatcgatggggtgatagaa
actctgacagacaaccataaaattctgatgtctcatgtgaaacagaaacggtcagagtct
cgcccagtctcaacagactccagagagaaagaacttgagaaaacggaggaagtggacaag
gttcctcttcggatcactatcaaagcagactccccgggggcatcatctaagagcagccat
gataatcttgaagtacctgaaaatagttatattgcgtacaccgtaccgtatctgcagaca
cttccctatgttcgtagcacaccaaaccttagtaacaaaaggaaaagtgtcaatgcgaga
aagatgaggccccccacagttattgatccagagcaggtcaatcaagcactaaaaattcac
caagccaaggagattgaccttgatgactcaaaggtcagtgatgatggagaggtcaaggac
actgaaactgcaaaagaagttggctcacaagaagacctgactaaattatccacaagtaat
gcagaaaaagtagagctggactctttgggaagtttacctgacacttccacaaagcttacc
cacatcgccaaatcccggccccggggcccacagaggaggcgcccgtctgcccgcccacag
gaggctgcccaggacaccggcgccgggctgaaggctgacgagggcctggattcgtttttt
acatcaagcccagcagaccaggggacacccaaatccagcaagtcagacaggaaagaaagc
ataggcaaagggtcggacaaaaaggagccacccccaaaacccacatcagagaaacctaag
aaaggaggattgttcaagcggaacacaggaaaagatgcaaaggagcaatcggatgaaaaa
catgacaaaagcaaaggagggtttgccagtaaattgtttgggaagaaaaattcagacaaa
aaagagaagacaccgcagaagtcagaaaccccagccaaggtggaggaaccaaaccgagag
gagcagggagaggactctgaaccagaaccggaaactaaaccagcaccagaaaattccact
cctgacacaatccctgagaaggaggatgtgaaaagtgaacaagaggctgaggaagctgct
cctactgaggagaagaaggaagaggcaccccggagaaagcttcctgtgggagggatcgga
attatgggtggtccaatgaatatgaacatcttctctgaaatgaagtcaaacaaacgattt
tctacactgaatgctgacaaggaagagaggaagccagcagttgctttacttccccctgga
aggaagtctcccactgccaatatccctcctccctttaaagagccagctaaggagtcccca
ctgaaaccagtggaggaaacaaaatcagaggaagaactaaaagtgaaggagaaaaccaag
ttggaggacaaaccaaaagtaaaggaagaaaccaagtcagaggagaaaccaaaagaaaag
gatgaaaccaagttagaggaaaaacctaaagtaaaagaggaaaccaagtcagaagaaaaa
cctaaagtaaaggaggaatccaagtcagaagagaaaccaaaagtaaaggaagagcccaaa
ttagaggagaaatcaaaggtaaaggaagaacccaaatcatcgaaagagcccaaagtggag
aaacctgttaaagaagagacaaaagaggaggtggcctcatcagaggtcaaggacactaca
gttgaggacaaatctgaccagaaagaggacaaggagagcaaaacagcagctcaagagagt
aaacagagcccagcagccatgatagggaacatcctatctaagcctaggccctctccgtct
cctcgctcaggcttgaggaggacacctgaggacacagcctcaaccccttccacagcctcc
cctaggtcctcgaggacgtctggcgacatctctaaacccttacccctgaggccaaagcca
ccacctaaggctccaaaaccatcaaacaagagccgaaaatctgatccggaatcaacagag
aagggagtttctagggagagtttggaaagtaaggagtctgccgctgacagtagaaaagag
gcccactctactcagagtgatgacagtggggtcgtggtggactccgccacactacgactg
tccgtcggggagaaaattaaacgactcagccaaagactacctgaaccagaaaacccccct
gcatccagcaaatccagttctctacccaaaaatgtttcattgaaaagttctttgaaatct
gaagtgcaagaaaatggtgactcggagaagtctggcgacaagcaggagaaatcagaggag
gaaaactcagacagttccaaacgtacctctgactcagacaagtctgaatctttgggcgaa
ggtgcaatagaaaatgtggatgaaatcatggtttaa
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integrated database retrieval system
