Magallana gigas (Pacific oyster): 105328103
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Entry
105328103 CDS
T03920
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105328103
Membrane trafficking [BR:
crg04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
105328103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
hEGF
Protocadherin
Motif
Other DBs
NCBI-GeneID:
105328103
NCBI-ProteinID:
XP_065945340
LinkDB
All DBs
Position
6:complement(6898052..6952866)
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AA seq
1693 aa
AA seq
DB search
MMPQTATNCVLSGFLLLVLMPWTSSFSLEGSLSSYAKFQAWQPCQNGSLSFEFQTSIPSA
LLMYTDDRVYRDYFELTLLVGALQLKVNLGGSHVRLNVGNNLNDSQWHKVSISRQGRTVT
LSVDQLSVSQELYGQNLEFGRGRNSPVFIGGLPSEYRDRQSELTLQHVIYQPFFNGDIRN
VLYSNCGAMLIRPEMLDHFGIVGETSLCTKDLCKNGGVCITMDTETKCDCSRTDYEGEFC
ETETQKSEATFFGSEYIFYDFMAQRTDHISSQSDRVEFYFRTEQHSGFLFYTGEKSDYIS
IALRSGTIMAIVNLGGGETKVDVSPSDYRFDDNQWHHLLLTRSSRKLTVGNAKYIVKMTV
DGIHSTERSMVGTFTMLDSKVLYVGGHPRAMRMGQGIIVTNYFKGCMKKVIYMADSLKLD
LSKMASMGNSFVQVEGKITFNQCQDIVETNPITFTTPESFIPLPRWEVRKEGSSLSFTFQ
TSEDKGVIMYNRRRGNSDFFAFEIFDGYLWFIIDLGSGAFKDKIAKKINDKMPHHVTLKH
FATRKSGSFSLDNEAKDYTVPGNSTNLNLDGELYVGGFGTTNEGIPKDLWAGTLGYGYVG
CMQDLVLNENKVDLLMVARKNSRAGIGDRCKVETWVKCSTRPCLNGGACSEGWNRYMCDC
RGTSYRGTQCQSVASTLNFDGGQYMKVAFPEESVTEVEDISLRFRTERESGLLLVTSSQK
SSDMLLLYLDRGKLKLEISISNQKEQMTIGRERLNDLAWHTVYMTRRGDTLTLKIDDNYP
SAVAFSSSYVKVMNIKLLLLGSPGPLPSDTYPRVHQSMNLLQMEVGRSIMPKDDLYLHQI
PSFVGSMQQFYFNNKEIIQLAKTNSLPNLNITAQFNSDAPVLKDTVTFKSKDAYVTLPKL
LARSQFSISFQFKTIELYGLLLYNGGQGPDFIAIELQDGYLHVLFNMGGGPQRVVVNIQQ
RLNDNQWHLVSVQRPGLEQIQIRVDDEHPTISDLTGSTKLHLDLTGYLYVGGVSKSMFND
IPYSSPYGFQGCMASVDFNGRRPNLFREAEKIYYGVEEGCQGASNSCRADSCMNGGYCIE
QWNSFQCDCKMTSYTGPRCMQESMSATFGPTPGLITYYYPPDSLPSRTSDRLAFGFRTSS
SQEKQVTLLRVESQTGADFLEVEIINGSVFVSYNMGSQMSVPIGDHFTKVTDGNYHVVKV
TRDGAAATLQVDSNDVIRKDPTSFLSKLFSVNEFPGEEQQWSVFNNQSKIIVGGNGKKPF
FRGSISGLVFNGKRVIDLACVQDPFVVKEGNVLLCPTTTRYDRKHEMQSTEGIRIDRKID
IRKIGIKRTQRRNSREVLSPYSSSKHSSNSNNAQVSGKDKVVKFSLMNSEELKLEDDLRL
EPQNILLDYMSDDADFDNRADYQGSGSGNQDMTSQEQDWRTIDVDYKASNSRYEDTVHHV
IPRKLETDPAESNQMKPWADIGLGRGQEGGVVLGEEEVVQFTYHPITETQTTPHDGVTDD
IIVPAGSGEGGIRCPEDDEDDCAQEEFSDNIISTTVKFTYKPTTKPPPKSTDTGPCYSKD
LLNCDNQVESTNLMKPDRNSSKSGQLNIEGSKPSTEYNPQRPANSSREQEVTQTPNLALI
IGIVGGVLVALIILIIALYKFRSRDEGTYKVDESQNFAFLEKKQQQGNGALLGNHSGGGG
KSGKKKDVKEWYV
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgatgccacaaactgccaccaactgtgttctaagtggtttcctgttgttggttttgatg
ccatggacttcaagctttagcctggaaggctcactatcctcctatgcaaagttccaggca
tggcaaccgtgtcaaaatgggtcgctttcctttgaatttcaaacttccattcccagcgcc
ctccttatgtacacggacgacagggtatatagggactattttgaattaactctcctggtg
ggggcactgcaactgaaggtcaacttaggaggcagtcatgtcaggttaaatgtaggtaac
aatctgaatgatagccagtggcataaagtgagcatcagtaggcaggggagaactgttacc
ctcagtgtagatcagctatccgtgtcccaggagttatacggacagaacctggagtttgga
cggggcaggaacagccccgtatttattggtggtcttccttctgagtaccgagatagacaa
tctgagctgaccttacagcacgtcatatatcagccattctttaacggcgatatccgaaat
gtcctgtatagtaactgtggagcaatgctgataagacccgagatgctggatcattttgga
attgtaggcgaaactagtctttgtacaaaggacttgtgtaaaaatggaggggtttgcatt
accatggatacagaaaccaaatgtgactgcagcagaactgactatgagggagagttttgt
gaaacagaaacccagaaatcagaagcgactttctttgggtcagagtacattttctacgac
tttatggcgcaacggaccgaccacatcagcagccagtcagacagggtggagttctatttc
cggaccgagcagcactctggcttcctgttctatacaggtgaaaaaagtgactacattagc
attgctttgaggagtggaacaatcatggccattgttaacttaggtggcggtgagaccaag
gtggatgtcagtcccagtgattatcgctttgatgacaaccagtggcaccacctgttgtta
accaggtcttcaaggaagctgacagtaggaaatgccaagtatatagtgaagatgacagtg
gacgggattcactcgacagagcggagcatggtcgggacgttcaccatgctagacagcaaa
gttctgtatgtgggtgggcacccccgcgccatgcggatgggacagggcatcattgtcact
aactacttcaaaggatgcatgaaaaaggtgatttacatggctgacagtttaaaacttgac
ctgagcaagatggcatcgatgggcaacagttttgttcaagtggaaggcaagataaccttc
aaccaatgtcaagatattgtagaaactaacccaattactttcaccacccctgagtccttc
atcccactccctcgctgggaggtaagaaaggagggatcctctctctcatttacattccaa
accagtgaagacaaaggggtcatcatgtataaccgcagaagaggaaattcagactttttc
gcctttgaaatatttgacggttacctgtggttcatcattgacttaggttctggagcattc
aaagacaaaatagccaaaaaaataaacgataagatgccacatcatgtgactttgaaacac
tttgccactaggaaatctgggtcattttctctggataatgaggccaaagattacactgtt
ccaggcaacagcacaaacctaaacctggatggagagctctatgttgggggatttggaaca
actaatgagggtattccgaaagacctttgggcagggactcttggatatggctatgttggg
tgcatgcaggacctcgtactgaacgaaaacaaagtggacctgttaatggtggccaggaag
aacagccgggcagggataggtgaccggtgcaaggtcgagacctgggtcaagtgttcaact
cggccctgtctaaatggaggggcctgttccgagggttggaacaggtacatgtgtgactgt
cgggggacctcatacagaggcacacagtgtcagtcagttgcatccactctaaattttgat
ggtggtcagtacatgaaagtggcatttcctgaggagtcagtgactgaggtggaggacatt
tcactgcggttccggacagagcgggaatccggtcttcttctggtcacctcctcccagaag
tcctcggacatgctgctgctatacctagacagggggaagctcaaactggagatcagcatc
agcaaccaaaaagagcaaatgacaattggccgagagagactaaatgacctagcttggcat
actgtttacatgacaaggcgaggggatacactcaccctgaaaatagacgacaattaccct
agtgcagtagcattctcttcctcctatgtgaaggtcatgaacataaaactcttgttgcta
ggttcccccggcccattgccttctgatacatatcccagagtgcaccagtcaatgaacctg
ctacagatggaggtaggtagaagcatcatgccaaaggatgacttatatctccaccaaatt
cctagctttgtgggatctatgcaacagttttactttaacaacaaggagattatccagctt
gccaagaccaattcacttccaaatctgaatatcactgctcagtttaactcggatgctcca
gttcttaaggacactgtgacattcaagtcaaaagatgcatatgttactcttcccaaactg
cttgccaggtctcagttttccatttccttccaatttaagacaattgagttgtatggtttg
ttactgtataacggtggccagggaccggatttcatcgctatagagctacaggatgggtat
ctccacgtcctgtttaacatgggcgggggcccacagcgtgtggtggtcaacatccagcaa
cgactcaacgacaaccagtggcacctggtgtccgtacaacgaccggggcttgagcagatc
cagatccgcgtggacgatgaacatccaaccatcagtgacctcacggggtcaaccaagctg
catctggatctgactggttacctttatgtcgggggagtcagtaagtccatgttcaatgac
attccgtattcatcaccttatggattccagggatgcatggcgtctgtcgactttaatggg
cggaggcctaacttattcagagaagcagagaagatttactatggtgtagaggagggttgt
caaggtgccagtaatagctgccgtgcagattcctgcatgaatggagggtattgtatagag
cagtggaacagtttccagtgtgactgtaaaatgacctcttacacaggaccaaggtgtatg
caagagagcatgtcagccacatttggtcccaccccggggctgattacctactactacccc
cctgactccctccctagccggaccagcgacagactggccttcgggttccggacgagctcc
agtcaggagaaacaagtgactcttttacgtgtggagagtcagacaggagcggacttcctg
gaagtagaaatcattaatggctccgtgtttgtgtcttacaacatggggtcacagatgtcc
gttcctattggagaccacttcaccaaggtaactgacgggaactatcatgttgtcaaggta
accagggacggggcagcagccacgctacaggtcgacagcaatgatgtcatcagaaaggac
cccaccagttttttatccaagcttttctctgtgaatgagtttccaggagaagagcaacaa
tggagtgttttcaacaaccaatccaaaatcattgtgggtggaaatggaaagaaaccattc
ttcaggggatctatttcaggtttggtgttcaacggtaaacgggtgatcgatctggcctgt
gttcaggacccgttcgttgtgaaggagggcaatgttttgctctgccccactactaccagg
tacgacagaaaacatgaaatgcagtcaacagaaggaataaggatagacagaaaaattgat
attaggaaaataggcatcaagcgaacccagagaagaaattctagggaggtactttcacct
tatagcagcagcaagcattctagcaattcaaataatgcacaagtgtctggcaaagacaag
gtcgttaagttttctttgatgaattctgaggagttaaaacttgaagatgacttaagacta
gaaccacaaaatattctgttggattacatgagcgatgacgcagactttgacaaccgtgca
gactaccaggggtcggggagcgggaaccaagatatgaccagccaagagcaggattggagg
accatagatgtggattataaggcgagcaatagtcgatacgaggacactgtccatcatgtg
attccaaggaagctagagaccgaccctgctgagtcgaaccagatgaagccctgggctgac
attgggcttgggcggggccaggaggggggtgtggtgctgggcgaagaggaagtggttcag
ttcacctatcatccaatcactgagacacagaccaccccacacgacggggtaacggatgac
atcatagtcccggcgggatcaggagagggaggaatcaggtgtccggaggatgacgaggac
gattgtgcccaggaggaattctcggacaacatcatctccaccacggtcaagttcacttac
aaaccaaccaccaaacctccacccaaaagcactgacacgggaccttgctattctaaagat
ttactgaactgtgacaatcaagtggagagcaccaacttaatgaagccagaccggaactct
tcaaagtcgggacagcttaacatagagggctctaagccttccactgaatataatcctcaa
cgccctgcgaactccagcagggaacaggaagtgacacaaactccaaacctcgcccttatt
ataggcatagtgggcggggttttagtagcactcatcattctaataatagcactgtataaa
tttcggagtcgtgacgagggcacgtataaagtggacgaaagtcagaactttgcttttcta
gaaaagaaacaacagcagggtaatggagcattgctaggtaaccacagtggtgggggcgga
aagtcaggaaagaagaaggatgtcaaggagtggtatgtgtaa
DBGET
integrated database retrieval system
