Magallana gigas (Pacific oyster): 105328274
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Entry
105328274 CDS
T03920
Name
(RefSeq) uncharacterized protein isoform X1
KO
K08701
nuclear receptor subfamily 1 group D member 3
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105328274
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
crg03310
]
105328274
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105328274
Nuclear receptors [BR:
crg03310
]
1. Thyroid hormone like
1D. Rev-Erb
105328274
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105328274
NCBI-ProteinID:
XP_034303845
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Position
2:9843687..9874429
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AA seq
1105 aa
AA seq
DB search
MFNLIQLLNQMRGLGKCNEEAEFDGDTVLCRVCGDKASGFHYGVHACEGCKGFFRRSIQQ
KIQYRPCLKNQQCNIMRVNRNRCQYCRLKKCIAVGMSRDAVRFGRVPKKEKARIIEQMQK
NTMHSQTSQMMTMFQNSRDLIQAIVTAHHHTCVFTHGNVRQMREDAIKNNNFVNCPAQMA
CPLNGNVTQSSEDTQGWSDMSEFFTPAIKSVVDFAKAIPGFCFLSQDDQVTLLKAATFEV
LLVRMACLFDPESNTMMFTCGRMFKREVSQTTSSAGFLLDSMFDFADRFNKLNLTDEEVA
IFSAIVLLSPDRPGLRNVEQLESFQMKLTECLQSMITANHKEDNTLFAKLLMKTTDLRTL
NTLHSEKSIGQNEKNGSDKSLDQTTANMDMNDQVDSSISEGSTVSDNSSIPTSLSGATGY
DSGIFEGIPIVPQRQSLETTHPHLVLKTPYGTFYREDSLGYYGLVSDQPIRRCHTLERDT
LSRPRLHTIEERRRYTLDKEYMDRKVHTLSERFQMEKAALRGNSMPPSLAGSAASSPIPP
QFFLDTRSPELKPVTSTESHSANNSLRGSPMFSSDNFIPIPSTSPKPGSPNFRSRSGSMG
MDDYSQLRPRCYSFHMNSEGKAARDPSREALQESYTMSAEMRRGSVGAVYGLHHKKKSLL
VDRHPRYLSRLSDSIVKRVDKIKSQETKKMSDSYENLPAVQLPVQPEQVTWLPPSTSSQV
SAAAGAPPTQTVDQKNPDPASTDQPLPGSPVAMDMDDDQSVDNQESSSVFHKKFDKLRKH
LIPTDNEESERKSKEEEEVMLDEDTNASTQDNFINERNDESQSMDDIPNKDLEKLHINDD
IKDKKTKSAVESHPQLLAHLNSSTPSLQMGFLKLPLQVSPKQTTTASSSQVLLNIPKVSG
RPSTVAKELPTLASQLNSAPLSHTSPFSRLVDQSNRRDNMHSETMSHLKDKLMRKYDSME
NLDKTGQVPPHQSQQASENDKHPPKISSSASSPNIPARLYPPGMCSDNVSGMFSQTGMPH
MHPAFMGSSGSGFVPRMFIMPGYNQHLAGMQQLAQIYAKSVDQERRKDQVHLQSSDGSEE
GDRKTHEGNYGPEPTLEQRIKTEMN
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatttgattcaacttttgaatcagatgagaggattggggaaatgtaatgaagaa
gcagagtttgacggggacactgtactgtgtagagtatgtggagataaagccagtgggttt
cattatggagtgcacgcttgtgaaggatgcaaggggtttttccgccgcagtatacagcaa
aagatacagtaccgaccatgtcttaagaatcaacagtgcaatatcatgagggtcaacaga
aatcgctgtcagtactgcaggttgaagaaatgcattgcagttggaatgtctcgagatgct
gtacgctttggtcgagttccaaagaaggagaaagctcgcatcattgaacaaatgcagaaa
aacacgatgcactcgcagactagtcagatgatgacgatgtttcagaacagcagggatctc
attcaggccatcgtaacggctcatcaccacacgtgtgtcttcacacacggcaatgtacga
caaatgagggaagatgccatcaagaataacaactttgtcaactgccctgctcaaatggcc
tgccctctgaacggtaacgtaacacaatcctcggaggacacacagggctggtcggatatg
tccgagttctttacgcctgccatcaagtccgtcgtagattttgccaaagctattcctgga
ttctgctttctaagccaagatgatcaagtgactctgttaaaggcagctacatttgaggtt
ctgctggtgcgcatggcatgcctctttgatcccgaatccaatacaatgatgttcacctgt
ggcagaatgttcaaaagagaagtctcacagacaacaagcagtgctggtttcttgcttgac
tccatgttcgactttgctgatcgcttcaacaaattaaacctcacggatgaagaagttgct
atattttctgccattgttctcctctctccagaccggcctggcctgagaaatgtggagcag
ttggaaagcttccagatgaagctgactgagtgtctacagtccatgattacagccaatcac
aaagaagataacacactgtttgccaaactcttgatgaaaacaacggacctacggactctt
aatactcttcactctgaaaaatcaattggtcaaaacgagaaaaatggatcagataaatca
ctggaccagactactgccaacatggacatgaatgatcaagtggattcatcaatatcagag
ggatcaactgtatcagacaactcttccatccccacaagtctgtcaggagctactggctac
gactctggaatctttgaaggaatacccatagttcctcaacgtcagtccttggagacaaca
catccccacttggtacttaaaacaccatatggaactttttatcgagaggattcacttgga
tactatggcctggtatcagatcagccaatcagaaggtgtcacacactggaaagagatact
ctctccaggccgcgactgcacacaatcgaagagcgtagacgatacacactggacaaggag
tacatggacagaaaggttcacaccctcagtgagagatttcagatggaaaaagcagcactg
cgtggaaacagcatgcccccatctctagcgggcagtgctgcctcaagccccattcctcca
cagttctttctggacactagaagtccagagctaaaacctgtcacgtctacagaatctcat
agtgcaaataacagcttaagaggaagccccatgttcagttcagataactttattcccatt
ccttcaacgtctccaaaaccaggatcccccaatttcagatctcgctcaggatccatgggt
atggatgattattctcaattgcgtccaaggtgttacagtttccatatgaacagtgagggt
aaggcggcccgggacccctccagagaagctctgcaggagagttacacaatgtcagcggag
atgaggcggggcagtgttggggcagtgtacggactccatcacaagaagaagtccttgctg
gtggatcgccaccctcgctatctgtcacgactctccgactccatcgtcaagagagtggat
aaaattaagagccaggagactaagaaaatgtcagattcttatgaaaatctgccagctgtt
cagctccccgttcagccggagcaggtcacttggctccctccctccacttctagtcaagtg
tctgctgcagcaggagctccccctacccaaactgtagaccagaaaaatccagatccagcc
agcacagaccagccacttcctggctcccctgtcgctatggacatggatgatgatcagagt
gtggataatcaagaatccagttctgttttccacaaaaagtttgacaaactgaggaagcat
ttgattcctacggataatgaagagtctgagagaaagtccaaggaggaagaagaagtgatg
ttggatgaagacaccaatgcctccactcaagacaacttcatcaatgaaagaaatgatgaa
tcccaatcaatggatgacataccaaacaaagacttggagaagttacatattaatgatgac
atcaaagataagaagaccaagtctgcagtggagagccatcctcagcttctggcacaccta
aactcaagcactcccagtctgcagatgggcttcttgaagcttccacttcaggtgtctccc
aaacaaacaacgacagcttcatcgtctcaagtcttgctgaatattcccaaagtcagtggc
aggccatctactgtcgccaaagaactgcccactcttgcttctcagctaaacagtgctcct
cttagccatacttctcctttcagtcgccttgtggatcagagcaaccgcagagacaacatg
cactcggagacaatgagccacctgaaggacaaactcatgcgcaagtacgacagtatggaa
aacttggacaaaactggtcaagtcccacctcatcagtcccagcaggccagtgaaaacgac
aagcaccccccaaagatctcatcctcagcctcttccccaaacatccctgccaggctctac
ccaccaggcatgtgttctgacaatgtcagtggcatgttttctcagacggggatgcctcac
atgcatccagccttcatgggatcatctggatccggatttgttcccaggatgttcattatg
cctggttacaatcagcacctggcgggaatgcagcagttagcgcagatttatgctaaaagt
gtcgatcaagagagaagaaaggaccaagtccatttgcaaagttctgatggaagtgaagaa
ggagacaggaaaactcatgagggaaactacggtccagagccaactttagagcaaagaatt
aaaacagaaatgaactga
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