KEGG   Magallana gigas (Pacific oyster): 105328421
Entry
105328421         CDS       T03920                                 
Name
(RefSeq) DNA excision repair protein ERCC-1 isoform X1
  KO
K10849  DNA excision repair protein ERCC-1
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg03420  Nucleotide excision repair
crg03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    105328421
   03460 Fanconi anemia pathway
    105328421
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crg03400]
    105328421
DNA repair and recombination proteins [BR:crg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     105328421
SSDB
Motif
Pfam: Rad10 HHH_5 HHH_2 FERM_M Glyco_tranf_2_2
Other DBs
NCBI-GeneID: 105328421
NCBI-ProteinID: XP_034306165
LinkDB
Position
4:43809869..43817026
AA seq 326 aa
MATERKKFKIPTADEVQDSSEASALNSFSKFQQMKKEGKVTDARDLDKSIRTDEQSTSSL
RQHMPSISVNPSKNLLPPHTSSSASSLSVSDNASKKTEISKPSNPSAPEPSIPTAVKSLN
TNSLIVNSRQRGNPILKFIRSIPYEFGDIIPDYEMGKTACALFLSLRYHQLNPNYIHERL
KQLRRYYDLRVLLVQVDIKEPHHLVKELAKICILADCTLILAFSAEEAGRYLETYKVYEH
KPPDAIMEKTEKDYMSKVTECLTSVRSVNKTDAMTLLSTFHTVEGVLKANQEDLSFCPGF
GPQKAKRAFDLFNEPFLKSKKKKITM
NT seq 981 nt   +upstreamnt  +downstreamnt
atggcaactgaacggaaaaaattcaaaattcctaccgcagatgaggtacaggactcatct
gaagcctctgcattaaactcatttagtaaatttcaacaaatgaaaaaggagggtaaggta
acagatgcacgggaccttgataaatccatcagaacagatgagcaatccacttcaagcttg
cggcagcacatgccttcaatatcagtgaatccgtcaaaaaatttgttaccccctcatacc
agtagttctgcctcaagtctctccgtgtctgacaacgcatctaagaagacagaaatcagt
aaaccatccaacccatctgctccagaacccagtataccaaccgctgtaaaatccttgaat
accaacagcttaatagtgaattcaagacaaagaggaaaccccatattgaaattcatacgt
agtattccttacgagttcggagacatcattccagactatgaaatgggaaagacggcttgt
gccctgtttctcagtctacgctatcatcagctgaatccgaactatattcatgaacgtctg
aagcagctgcgcagatactacgacctgcgggtattattggtgcaggtggacataaaagag
cctcatcatctcgtgaaagagttagccaaaatctgcatcctagcagactgcactttgatt
ctggctttttctgcagaggaagcaggacgataccttgagacttacaaagtctacgagcac
aaaccaccggatgccataatggagaaaacggagaaggactacatgtcaaaggtcactgaa
tgcctgacctcagtgaggtcggtcaacaaaacggatgccatgaccttactaagcacattt
cacacagtggagggtgttctgaaggcaaatcaagaggacctgtctttctgtccagggttc
ggaccccaaaaagcaaagagggcgtttgatctgtttaatgagccttttttgaaatccaag
aaaaaaaaaataaccatgtga

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