Magallana gigas (Pacific oyster): 105328601
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Entry
105328601 CDS
T03920
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7 isoform X1
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105328601
Enzymes [BR:
crg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105328601
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
105328601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_SCAP
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
zf-RING_6
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_WDR19_2nd
Beta-prop_IFT140_2nd
WD40_MABP1-WDR62_1st
zf-C3HC4_3
zf-C3HC4
Beta-prop_NWD2_C
zf-C3HC4_4
ENOX1
CENP-Q
Sina_ZnF
WDR90_beta-prop_4th
Sina_RING
zf-Nse
ABC_tran_CTD
Beta-prop_IFT140_1st
zf-TRAF
Cep57_CLD_2
Beta-prop_Vps41
PI3K_P85_iSH2
CCDC106
zf-RING_2
Beta-prop_HPS5
SKA1
bZIP_1
CENP-F_leu_zip
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
105328601
NCBI-ProteinID:
XP_065934520
UniProt:
A0A8W8JU07
LinkDB
All DBs
Position
3:complement(10044447..10060543)
Genome browser
AA seq
606 aa
AA seq
DB search
MASNTNDNETEPILLVNKLTPHFLCPVCGQLYRNPVINIKCGHTFCKNCASGCSQCPVDN
EPCDASQLIVNRLVVGQIDELLIYCKYGIRKENGIYVVDPTGCQEQIAIGNRHQHENECS
FIPKPCPNDVENCGTFRSSELDHHLQVCPYFECEHKDKGCEFHGRQEEVGDHQGRCGYRG
LPKAISQKDFKDQTKALESENRCLREKLDSLTKRVEVLEGNKNSLESSLELCLSNYQNLS
KKHEALQTIVEQLMTTRNRRSMTSPGNSAEVIRQRSSSTSSFSRVRFSGEFGPKLSPLAN
SKTESWKMPFQFKCIGSLRGHKKVVWCLALYKQRLYSSGADNLIKAWDLDVLTNGCIKTM
EGHTGVVHSMATYENSLVSGGEDLSIRVWNLDSHTEENCIFNAHDNLISSMVVVGDNLFT
ASYSLIKVWDMKTLSLVHTISGLHHWVRALVVSQDKECLYSGCHNTIGIWSTSGSFQHLG
NIPHNYGSIYSLAITHEFLIAGTYNRNIQVFNLSNNQHVFSLRGHIGVVTSLTVTPSGHF
LVSSSSDQTIMIWNLENMLPIQTLHRHESGVNAVILFRDFLLSGSEDNEIKLFQYFQMQM
GFALQT
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaatacaaatgacaacgagacggaacctattctgctggtgaacaaactgacc
cctcactttctgtgcccagtgtgcggacagctgtacaggaaccccgtcattaacatcaaa
tgtggacacacgttttgtaagaattgtgccagcggatgttctcagtgtcccgtagataac
gaaccttgtgatgccagtcagctaatagtaaacaggcttgttgttggtcaaatagatgaa
cttctgatttattgcaagtacggaattagaaaggagaatggaatttatgtagtagaccct
actggctgccaagaacaaattgccattggaaatcgacatcaacatgaaaatgaatgcagt
tttatcccaaaaccttgtcccaatgatgtagagaattgtggaacatttagatcatcagaa
ctggaccatcaccttcaagtctgtccttacttcgaatgtgaacacaaagacaaagggtgt
gaatttcatggcagacaagaggaagtgggtgaccaccaggggaggtgtggctacaggggc
ctcccaaaggccatcagccagaaggatttcaaagaccagacaaaagcattagaatcagaa
aacagatgccttagagagaaactggacagtttgacaaagagagttgaagttttagaagga
aacaaaaactctttggaatcttctttagagctgtgtttaagtaattatcaaaatttgagt
aagaaacatgaagctctgcagacaattgtcgaacaactaatgaccactcgtaatcgacga
tccatgacctcgccaggaaattccgccgaagtgatacggcagagatcaagtagcaccagc
agtttttcaagagtacgtttctctggagaatttggtcctaaactgagtcctctagcaaat
tcaaaaacagaatcctggaaaatgccattccagttcaaatgcataggatctctcagaggc
cataagaaggtggtgtggtgcctggccctgtacaaacagagactgtacagctctggggcc
gacaacctgatcaaggcgtgggatctggacgtactcaccaacggctgtatcaagaccatg
gaggggcacaccggggtggtgcactctatggccacatatgagaactcactggtgtcgggg
ggagaggatttgtccatcagggtctggaacttggattctcacacagaagaaaattgtatc
tttaatgctcatgataacctgatcagctccatggttgttgttggggacaacttgttcact
gcctcctactctctcatcaaagtttgggatatgaagactctctcattagttcacacaata
tcagggctacatcactgggttcgagctctcgttgtaagccaggacaaggaatgtctatac
agtggatgtcataatacaattggcatttggagcacctctggatctttccaacatttagga
aacattcctcataactatgggtcaatttactctctggccataactcatgaatttctcatt
gcaggaacatacaacagaaatatacaggtcttcaatttgtcaaacaatcaacatgtcttc
tcacttagaggtcacattggggtcgtgacctctcttactgtgaccccatcaggtcacttc
ttggtttcctcatccagtgaccagactataatgatttggaaccttgagaatatgctgcca
atccagacccttcaccggcacgagagcggagtcaatgccgtgattctgttcagagacttc
ctgctgtcaggctcagaggacaatgaaatcaagctgtttcagtacttccaaatgcagatg
ggatttgctctacagacgtaa
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