KEGG   Magallana gigas (Pacific oyster): 105328709
Entry
105328709         CDS       T03920                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg03030  DNA replication
crg03410  Base excision repair
crg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105328709
   03410 Base excision repair
    105328709
   03420 Nucleotide excision repair
    105328709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:crg03032]
    105328709
   03400 DNA repair and recombination proteins [BR:crg03400]
    105328709
Enzymes [BR:crg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     105328709
DNA replication proteins [BR:crg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    105328709
DNA repair and recombination proteins [BR:crg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      105328709
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N
Other DBs
NCBI-GeneID: 105328709
NCBI-ProteinID: XP_034299725
LinkDB
Position
2:complement(51296714..51325486)
AA seq 2273 aa
MVLQNSGKYKADNDPDNTGREDGSDRRLQRALAGDAVDSKFGFDRYKEAKDRTGWLINMH
PADILDENKQLISAVDYYFLEEDGSRFKATLPFKPYFFVATKQGCEREVASYLTKKFSGK
LATVETVFKEDLDLPNHLVGLKRQYLKLSFLSVEDLTKVRREIQPAVRKNKEREQSSEAY
TTLLSNHLLGADGDNSENKATNQMENIIDIREYDVPYHVRVSIDLKIFVGHWYTVRGRGS
LPVEIRHREDLVDRPDPVVLAFDIETTKLPLKFPDSQTDQIIMISYMIDGQGFLICNREI
VSQDVEDFEYTPRPEFEGPFTVFNEPDEEALLRRFFDHILEVKPQIFVTYNGDSFDWPFV
ETRAAIHDIDMSLEIGFQKDNQGEYKSRPAVHMDCFRWVKRDSYLPVGSQNLKAVAKAKL
RYNPVELDPEEMCRMASEEPQVLANYSVSDAVATYYLYMKYVHPFTFALCTIIPMEPDEV
LRKGSGTLCEALLMVQAYHANIVFPNKQEAIWNKMTDDGHVLDSETYVGGHVEALESGVF
RANIPCRFRMVPEAFQNLIDKVDKTMKHAIEVEEKIPMEEVTNFDEVCADIIESLSMLRD
CPNRLENPIIYHLDVGAMYPNIILTNRLQPPAIIDESTCAACDFNKPGATCQRKLPWMWR
GEYMPASRNEFHRIQQQLENEKFPPYQPGGPPRAFHQLTKEEQATAEKKRLSDYCRKAYK
KVHSTRIEERIATICQRENSFYVDTVRAFRDRRYEFKGLNKAWGKKLAEAKKSGDAAEIK
KANGMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVCYTGANIITKAREIVEQ
IGRPLELDTDGIWCVLPATFPENYVVKTTNAKKPKVTVSYPGAMLNIMVKDFFTNDQYQE
LEDARSLKYSVRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNFDGSLAELKGFE
VKRRGELELIKIFQSSVFEAFLKGTTLDECYAAVAKVADYWLDVLFSKAANMPDSELFEL
IAEKRNMSRTLADYGEQKSTSISTAKRLAEFLGDQMVKDAGLNCHYVISKKPEGAPVTER
AIPLAIFQAEPSVTKHYLRKWLKSPSLTDFGIREILDWEYYIERLGGCVQKIITIPAALQ
QVANPVPRVPHPPWLHKKLMERNDVFKQKKISEIFAPAQRKKTEEISSERELFSQEDEQT
PSVTDMEDMMNFKKPTNGMVLSHKRKRDRSSIGDSEASQDSQGSQTWREILGTPPPMGNT
KEERKVWLEYHKKKWQLQAKDRTERKRRRVEFGDVPTGTYLGGNKSGLSGFLRRTARSIM
DMPWQIVQLMETGHPGQFKLWALIGNDLHAMKVNVPRIFYVNQRTPKEGEGAMWKKVIKT
LPRSHPVMYLYEYSVPEDVYEEHINEISADLSSPDIEGVYETQVPLLFRALYRLGCITTV
NRDFAKYMQGRETDTFELDHLNFRTLAQFSYLEPGSIKHIYLYHHICGNKMVFGLFFPMS
KRAVVYIVDTVRSDQMPTLTALFNAERNSKLSKVDEEDLPPANHTFDYKLEKDVRQVYRS
IQRSLSAYKDEKRGPTYIAIQSPQDFQHLTSSMPGLNDFPLVPIHITDSDRLYSVLDWQR
VGCRRMIQHYLNVKIILQSMTEQCRYLHIPLGNLPKDITMFGCDLFFARHLQKSNHVLWC
SPTERPDLGGKEADDNRLCMELEESTSVEVNNPGTFPTVCVELGISSLAVNTIIESAHVN
DQEGASAVSFDTLPQSSLEEMVQGQGAATYLASYDETALCSTSFRILKTMVHGWVRDVTL
YNNIFADNQIIHFYRWLRSSNALLYDPALRRTLHNMMKKVFLQLISEFKRLGSNVVYGNF
NRLILCTKKRRLVDALGYVEYITNSIKTRDLFKLVEMSYEQCWEYLMWLDPANHGGVKGK
LPSESPLEQTQPDPEKEGGPDSEEEGEETEREEREVLNRSEDEDEPEIEMNWNIMHFLPE
AGACQTNFNLIVAGYILSVYNQLQEEQKVQTPGNTPVKRRHNSQSQKVVETTTTPQSVTF
AQELVAGDLAQQMFLLTQKIHKKFGHISDMSGEFPNRPGSHLSMQNPALEFIKCVCKVLS
LDSNINLQVIKLKRDLLKLIGIGEFAEEAAFSDPCLSYVLPEVICKSCNHIRDLDLCRDP
YLSQERSDSSWACVQCKAPYDMDEIEDTLLDAIHRKSMAFILQDLKCVKCNGIKENNMRK
YCRCAGDFTNTVPAADLYKTLMTFRGIARHYEMVLLMGTVDWILKMNPQMSNN
NT seq 6822 nt   +upstreamnt  +downstreamnt
atggtgttgcagaacagtgggaagtacaaagcggataatgatcctgataacacgggacga
gaagatggttcagacagacggcttcagagggcacttgctggtgatgcagtggacagcaag
tttgggtttgacagatacaaagaggcaaaggatagaactggatggcttatcaatatgcac
cctgcagacatattggatgagaataagcagttgataagtgctgtggattattactttcta
gaagaagatgggtctcgttttaaggccacacttccgtttaagccatacttctttgttgct
acaaagcaaggatgtgaaagagaagtagcatcgtatttgaccaaaaaattctcagggaaa
ttagccaccgtagagactgttttcaaagaggatttagacttgccaaatcacttggtggga
ctaaagcgacaatatttgaagctgtcttttctctcagtggaggaccttacaaaagtgaga
cgggaaatccagccagcagtccgcaaaaataaagagcgagaacagtccagtgaagcttac
acaacgttgctcagcaaccatcttcttggggcagacggggataattctgaaaacaaagca
acaaatcaaatggagaatatcattgacataagagagtatgacgttccataccatgtgcga
gtttccattgacctgaagatctttgtgggtcactggtacacggtgagggggcggggatca
cttccagtagaaattcgccacagagaggatctcgtcgacaggccggatcctgttgttttg
gcttttgacatagaaacaacaaaattacctctgaagttccctgattctcaaactgatcag
ataataatgatttcatacatgattgatggccagggtttcttgatctgtaaccgtgagatt
gtgtcacaggacgtagaggactttgagtacaccccacgccccgagtttgagggaccattc
actgtcttcaacgagccagatgaggaggctttgctgagacgattctttgaccacattctg
gaagtgaagccccagatatttgtgacgtacaatggagatagttttgactggccatttgtt
gagacgcgagctgctatacacgacatagacatgtccctagagataggcttccagaaagac
aaccaaggagagtacaagtcccggcctgctgtccacatggattgcttcagatgggtaaag
agagacagctatttgccagttggaagtcagaatctgaaggctgtagcaaaggccaagttg
agatacaatcctgtagagctggaccctgaggaaatgtgtaggatggccagtgaagaaccg
caggtcttggcaaactactctgtgtcagacgcagtagctacatactatctgtacatgaag
tatgttcatccctttacatttgccttgtgcaccatcattcctatggagccagatgaggtt
ttgagaaaaggctctgggactttatgtgaagcattacttatggtccaagcctatcacgca
aatattgtgttccctaacaaacaggaagccatctggaacaagatgacagacgacggacac
gtgctggactcagagacctatgttgggggtcacgtagaagccctggagtcaggggtcttc
agagcaaacataccttgtagatttagaatggtaccagaggcattccagaatctgatagac
aaagtggacaagacgatgaagcatgcgatagaggtggaggagaagatcccgatggaggag
gtgacaaactttgacgaggtgtgtgcggacatcattgagagtctgtctatgctaagggac
tgtcccaacaggctggagaaccccattatataccacctggacgtaggcgcaatgtacccc
aacattatcctgaccaacaggttacagcctcctgctattattgatgagagcacctgtgct
gcatgtgattttaataaaccaggggccacctgtcagagaaagttgccctggatgtggagg
ggagagtacatgcctgcctctaggaatgagttccacagaattcagcagcagctggagaat
gagaagttccctccctaccagcctggtggcccaccgcgagccttccaccagctgaccaag
gaggaacaggccaccgctgagaagaaaagactctcggattattgccggaaagcttacaaa
aaagtccattccactcgcatagaagagcgaattgccactatctgccagagagaaaactcc
ttttatgttgacactgtgcgagctttcagagatcgcagatatgaatttaagggcttaaac
aaagcctggggtaaaaagttagcagaggccaagaagtctggggatgcagcagaaataaag
aaagccaacggaatggtggttctgtacgattctcttcagctggctcacaagtgtatcctc
aactcattttatggatatgtcatgagaaaaggagcccgatggtacagcatggagatggcg
ggggttgtgtgttacacaggggccaacatcattaccaaagccagggaaatagtcgaacag
attggtcgccctctggaactggacactgatggtatttggtgtgtgttgcctgctacattc
ccagaaaactatgtagtcaagacaaccaatgccaaaaaacctaaagttaccgtgtcatat
ccaggagccatgctaaatatcatggtcaaggactttttcaccaatgaccaataccaggag
ttggaggatgctagatccctgaagtactcggtacgcagtgaaaactccatcttctttgaa
gtggatggcccctatcttgccatgatcctgccggcttcaaaggaggaagggaagaagctg
aagaagagatatgcggtgttcaactttgatggatctctagctgaattaaagggttttgag
gtgaagagacgaggtgagttggaactgatcaagatcttccagtcctcggtgtttgaggcg
tttctgaagggcaccaccctggacgagtgttatgcagcagtggctaaagtagctgactat
tggctggatgttctcttcagcaaggcagctaacatgcctgactcggaactgtttgagttg
atcgctgagaaacgtaacatgtccagaacactggcggactacggcgagcagaaatccacg
tctataagtacagctaaacgtctggcagagtttttgggagaccagatggtaaaggatgct
ggtttgaattgtcactatgtgatctccaaaaagcccgagggggcaccggtcactgagaga
gctatccccctggccatcttccaggcagagcccagtgtgaccaagcattatctcaggaag
tggctcaagagccccagcctcacagactttgggatcagagagattttggattgggaatac
tacattgagagacttgggggctgtgttcagaagattatcaccattccagctgctctacaa
caggtggccaacccagtccctagagtgcctcatccaccctggctccacaagaagctgatg
gagaggaacgatgtgtttaagcagaagaaaatcagtgaaatcttcgctccagctcaaagg
aagaagacagaggagatttcctcagagagggagctattctctcaggaggatgaacagact
cccagtgtgacagatatggaggacatgatgaacttcaaaaagcccacaaatggcatggtg
ctcagtcacaagaggaagcgagaccggtcgagcattggagactcggaggccagtcaggat
tcccaggggtcacagacctggagggaaatcctgggaacacccccgccaatgggaaacaca
aaggaggaaagaaaagtttggctggagtatcacaagaagaaatggcagcttcaagccaaa
gacagaacagagaggaagaggagacgggtggaatttggagatgtcccgactggaacctac
ctgggcggaaacaagtccggtcttagcggattcctgcggcggactgctcgcagtatcatg
gacatgccctggcagatcgtgcagctgatggagacgggacacccaggacagtttaagttg
tgggcactgattgggaatgaccttcatgccatgaaggtcaatgtcccccgaatcttttat
gtcaaccagagaactcccaaggaaggagagggagccatgtggaagaaggtgataaagacg
ctccctcgctcacaccctgtgatgtacctgtatgaatactctgtcccagaggatgtgtat
gaggagcacatcaatgagatcagtgcggacctttcctccccagacatagagggagtgtat
gagacacaggtccccctgctgttccgagctctctacagactcggctgtatcacgaccgtc
aacagggactttgccaagtacatgcaggggcgagaaactgacacctttgaactggatcac
ctgaatttcaggactcttgctcagttttcctatttagagccaggctctataaaacacatc
tacctgtatcatcacatatgtggaaataaaatggtgtttggccttttctttccgatgtcg
aagagagctgtggtttatattgtggacacagtcagaagtgaccagatgccaacactgacc
gcactattcaatgcagaaagaaactcaaaactgtccaaggtggatgaggaggacctgccc
cctgccaatcacacctttgactacaaactggagaaggatgtacgacaggtgtacaggtca
atccaaaggtcactgtccgcctacaaggacgaaaagcggggacccacctacatagccatc
caatcacctcaagatttccagcacttgacctcctccatgccaggactaaatgattttcca
ttggtgcctatccacatcacagacagtgaccgcctgtacagcgtgttggactggcagaga
gtgggatgtaggcgtatgatacaacattatctgaacgtcaaaatcatcctccagtccatg
acggagcagtgccggtacctacacatcccccttgggaacctccccaaggacatcaccatg
tttggctgtgacttgttttttgcccgccacctccagaagagcaaccacgtgttgtggtgc
tcccccacagagcgacctgacctcgggggcaaggaagcggacgacaacaggttgtgtatg
gagttggaggagagtacaagtgtggaggtcaacaacccggggaccttccccactgtgtgt
gtagagctaggaatctctagtctggccgtcaacaccattatagagtcggcccatgtcaat
gaccaggaaggggccagtgctgtgagttttgacacgctccctcagtcttcattggaggaa
atggttcagggccaaggtgctgccacctatctggcaagctatgatgaaactgctctctgc
tcaacaagtttcagaattctaaaaacaatggtgcatggttgggtgagagatgttaccctg
tacaacaacatatttgctgacaaccaaatcattcacttctataggtggctgcgttcttcc
aatgccctactgtatgacccagccctgcgcagaactcttcacaacatgatgaaaaaagtc
tttctgcagctcatatcggagtttaaacgactgggatcaaatgtagtgtatgggaacttt
aaccgtctgattttgtgcactaagaagcggcgtctggtggatgccctgggttacgtggag
tacatcaccaacagcatcaagacgcgggatctgttcaaactggtggaaatgtcgtacgaa
cagtgctgggaatacctgatgtggctggaccctgccaaccatgggggagtaaaggggaag
ctgccctcagaatcccctctggagcagactcagcccgacccggagaaggaggggggtcca
gatagtgaagaggagggggaggagacggagagggaggagagagaggtcctcaacaggtct
gaggacgaggatgagcctgaaattgaaatgaattggaacataatgcatttcctaccagaa
gcaggtgcttgccagacaaatttcaatctgatcgtggctggatacattttgtctgtgtac
aatcagcttcaggaggagcagaaagtccagaccccagggaatacacctgtcaagcggcgg
cacaacagccagagtcagaaagttgtagagacgacaaccacaccacagtccgtgaccttc
gcacaagagctggtggccggagatctcgctcaacaaatgtttctactcactcagaaaatc
cacaagaaatttggtcacatcagtgacatgtctggtgaatttccaaacagaccaggctca
cacttatccatgcagaacccagctttagaattcatcaaatgtgtctgtaaggttctttcc
cttgatagcaatattaaccttcaggtgataaagttaaagcgagaccttctgaaactgata
ggaatcggagagtttgccgaggaagcagccttctccgacccatgtctctcctatgtgtta
ccagaggtcatctgtaaatcatgtaaccacatccgtgaccttgacctgtgtcgtgaccct
taccttagccaggagaggtcagactcctcctgggcctgtgtgcaatgtaaagccccctat
gacatggacgagattgaggacacacttcttgatgctattcaccggaagtccatggccttc
atacttcaagaccttaaatgtgttaaatgcaatggaattaaggagaacaacatgaggaag
tactgtagatgtgctggagactttacaaacacggtgcccgctgctgatctgtacaaaaca
ctgatgacattcagaggaatcgcaaggcactatgagatggtactactgatgggaacagtg
gattggattttgaaaatgaacccacaaatgagtaacaattaa

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