Magallana gigas (Pacific oyster): 105328946
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Entry
105328946 CDS
T03920
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crg03036
]
105328946
Enzymes [BR:
crg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105328946
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Meiosis-specific proteins
Others
105328946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
HHH_5
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
105328946
NCBI-ProteinID:
XP_065926332
LinkDB
All DBs
Position
8:12679705..12703300
Genome browser
AA seq
1596 aa
AA seq
DB search
MKNSVYSQMFYGDSQDTRFTHPPSNEGDADEFEDNEDCPVPAAPGADFLPASQLDPFIDF
EPSQIFRSSQNKASKEKVLKEIPNDSFRTPSEKTNPPMVSQSQRRQLFKPPTKANHFQAP
GKGESRTFQSNSSNDNSALRSGTLSDSAANQDFSLTQPGSNVQIVSPSTVPALKKKYYTP
SPLVLNQGQNAGVELKSTKEIAEKYRCVFPFPYFNIVQTKVFDEIFYKDSPIVVCAPTGA
GKTVVFELAIIRLLMKTEHTSLGANFKIVYMAPIKALCSERCSDWSEKFERFGLKCRELT
GDSELDDYYQLQQVNIIFTTPEKWDSMTRRWRDNTFIVQSICLFLIDEVHVLSDASRGAT
MEAVISRMKTIQASMNRCSPGSLTPRLRFVAVSATIPNIQDIAEWLGDKVPAVNFNMDDS
LRPVRLRKVVLGFPFDEQKGSDFQFDMSLSYKLARIINTYSDNKPTLVFCSTRKSTQQAA
EILVKDIGSTYIKTYFQRQALQTCANSLKDNKLRDLVARGVGYHHAGLDVHDRKAIEEIF
LEGQLMVLVATSTLAMGVNLPAHLVVLKSTSYYNLGVHVEYSDTQILQMIGRAGRPQFDT
TATAVIMTKNQTKQKYESLVNGTQLIESSLHKNLIEHLNAEIVLHTINDISIAMEWIRYT
FLYIRVMKNPKHYGMPLGMNREQIEKRLQELCMRNLNLLNTHGMITMDDETIDVKSTEPG
KLMARYCIAFETMRRFSKLGPTETIAELLHEMCGCDEFSEVQLRNNEKKTLNTFNRDKNR
ITVRFPVTGKVKTKQMKVNILIQVALGCLLLQDFSLQQDTTRIFRAAQRMSRCLVELLWL
KDEYKSLLSGVQLMKCLKARLWEDSRYVSKQLDGIGPALSNALVNAGITTFQKISDTNPR
ELELIVNRHPPFGNQLRDMVSGLPKYELTIEQVSKYSEDMADIVVHLVIANPEEVGTRRT
LPENHTCVLLIGDEDNRVVYKRKIMDAYLLKEHGITKKLEVRRSEKGPNLFINLISQEWV
GLDVQSTYTPYYIGAKKISNNANSLESTQTSQQNRTPSAFSACTEECGHRCVNKAMCGHD
CCRNGVNKRKTPKTRPKTLQVPKHKPMDSYVSTLKDRVSQTQNIAKRLKMAGNNTFCTKL
DLNRFAYSPQKRKVTSSRPCQLAQNTNDDDVEETCLDELEMLNSRSVYTDQANKDIAPSC
SKDWTDLDIYLKHNAVEDEMQCGYEEDDPVKDEMQYGYGEDQNFTEENDTDFKRFTSTAG
VVSKSKECLKFPTPRFGEVLAWSNDKENIGPCPLSSSRNMLKSSRHPWGLNRDTLDVLSC
SDGYDDRNRTSFDQKDMRDERSNHDSHADMDCYIQEQNWNINPPLQTSGKKPKYRYMKNN
LQCCPRISNENCSRFNSKNKLNTMAWDGLECQRDKTVPELLDDKSKSSAVEGDWSGSDSD
LMIVDDEEFRDILYCKDSPEEKTRVTSNFSNSVQDDVCQNMYSVGSSYCEKSEKLRKAER
EMEIFLFGSNAESKMETKDTDTSNGYTESKESGKCPNKVLTLNDRDIIYQKPQDFKQYDE
ISTDVNLAQQSSACTPCYGGPRPNGKTFSSIFDALF
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacagtgtctacagccagatgttttatggagacagccaggacacacgatttaca
cacccaccgagtaacgagggcgatgctgacgaattcgaagataacgaggattgcccagtg
cccgcggccccgggggccgattttctgcccgcatcccagttagatccattcattgatttt
gaaccatcccagatattccgaagctctcaaaataaggcatcaaaagaaaaggttcttaag
gagattccaaatgactcattccgtacaccatcagagaagacaaatcctccgatggtttct
caatcccaaagaagacagctatttaagccgccaacaaaagcaaaccattttcaagcgcct
ggaaaaggagagagccgcactttccaatcaaattcatctaatgacaatagcgcgctaaga
tctggcacactgtcagattctgcagccaatcaggatttttcactcacacaacctgggagt
aatgttcagatcgtctcaccatctactgtaccagctctaaaaaagaaatattacactcca
tctcctcttgtgttaaatcaaggacagaatgcaggagttgagttgaaatctaccaaagaa
atagccgaaaaatacagatgtgttttcccatttccatattttaacattgtgcagaccaaa
gtgtttgatgagattttctacaaggattcccctattgttgtgtgcgcaccgaccggtgcc
gggaagacagtggtgtttgaactggcgatcatccgtctccttatgaaaacagaacatacg
tcattgggcgcgaatttcaaaattgtctatatggccccaataaaagccttgtgcagtgag
cgttgttctgattggtccgaaaagtttgaacggtttggattgaaatgtcgagaactgacc
ggcgactcggagcttgatgattactaccaactccagcaagtcaacatcatattcacaaca
ccggaaaagtgggacagcatgactagaagatggcgcgacaatacatttattgtgcagtct
atttgtttatttctgattgatgaggtgcacgttttgagtgacgcctcgcgtggtgctacc
atggaggcggtgatttcccggatgaagacgatccaggcgtcaatgaatagatgttccccc
ggatccttaactcccaggcttagattcgtggccgtgtctgcaaccattccaaacattcag
gatatcgccgaatggctgggggataaagttcctgctgttaatttcaatatggatgacagt
ttgcggcctgtccgactccggaaggtggtgctgggattcccgtttgacgaacaaaaaggc
tcggacttccagttcgacatgtccctcagctataagctcgccaggatcattaacacgtac
tctgacaacaaaccaacactcgtgttctgctcgacaagaaagagtacccagcaagcggca
gagattctggtgaaggacattggtagtacctacataaagacctacttccaacggcaggcc
ctacagacatgtgctaactcactcaaggacaacaagctcagggacttggtagccagggga
gtgggctatcatcacgctggtctcgatgtccacgacaggaaagccatagaggagatattt
ctggagggccagctgatggtgttagtggcaacaagcacactagcaatgggcgtcaacctc
ccagctcacctggtggttctaaaatccacgtcctactacaacctgggtgttcacgtggaa
tactcggacactcagatactgcagatgattggacgagcggggcggccacagtttgacact
acagccactgcagtcatcatgaccaaaaaccaaaccaagcaaaaatacgaatctttggtg
aatggaacccagctgatcgagagcagcttgcacaagaacctaatcgaacacttgaatgcc
gagattgtcctgcatacaatcaacgacatctctatcgccatggagtggattagatataca
tttctgtatatccgtgtcatgaaaaatcctaaacattatggtatgcctttggggatgaac
agagaacaaatagaaaagaggctacaagaactttgtatgcggaacttgaacttgttgaac
acacatggaatgatcactatggacgacgaaaccattgatgtcaagtccacggagccagga
aaactaatggccagatactgtattgcatttgagacaatgaggagattttctaaactaggg
ccaacagaaacaatcgctgaactattgcacgagatgtgtggctgtgatgaattctcggag
gtccagctcagaaacaacgagaagaaaacattgaatactttcaacagagataaaaacagg
atcactgttagatttcctgtaactggtaaagtaaagacgaaacaaatgaaggtcaatatt
ttgatccaagtggctcttggttgtcttctgctgcaagacttctccctacaacaagacacc
accaggatatttagggcggcccagaggatgtcaagatgtttagtggaacttctgtggctc
aaagacgaatataagtctctgttgagtggtgtccagctgatgaaatgcttgaaagccagg
ctctgggaggactccagatatgtctctaagcagctggatggaattggaccagcgctttca
aacgctctggtcaatgccggcataacaacttttcagaagatttccgacacaaatcctagg
gaactagaattgattgtcaaccggcatccaccatttggaaaccagctgagggatatggta
tccggactaccaaaatacgagttgactatcgaacaggttagcaaatacagcgaagacatg
gctgacattgtggtacacctagttatcgccaacccggaagaagtcggcacgaggaggaca
cttccggaaaaccacacatgcgttcttctcataggagacgaggacaacagagttgtatat
aagaggaagataatggatgcatatttactgaaagaacatggaattacgaagaaactggag
gtcagacggtcagagaaaggacccaatctgtttatcaaccttatcagccaagaatgggtt
ggacttgatgtgcagagcacgtatactccttattacattggggcaaagaaaatatcaaac
aacgcaaactctctggagtcgactcagactagtcagcaaaacagaactccctctgctttt
tctgcttgcaccgaagaatgtggccaccgctgtgttaataaggctatgtgtggtcacgac
tgctgtcgaaatggtgtcaataaaaggaagacacccaagaccagacccaaaactctccag
gtcccaaagcacaaacctatggactcctatgttagcaccttgaaagacagagtttcacaa
acgcagaatattgcaaaacgattaaagatggcaggtaacaacacgttttgcaccaaattg
gacttgaatagatttgcatacagtcctcaaaagaggaaagtaaccagttctcgcccatgt
cagcttgctcaaaacacaaatgatgatgacgttgaagaaacatgcttagatgaactggaa
atgttaaattcaagaagtgtttatacggaccaagcaaacaaggatatagctccctcttgt
agtaaagactggactgatttggacatctatttgaaacataatgcggttgaggatgagatg
cagtgtggttatgaagaagatgatccagttaaggacgagatgcaatacggttatggggag
gatcaaaattttactgaagagaatgacacagatttcaaaagatttacatcaactgcgggt
gttgtatccaaatcaaaggaatgtttgaaatttccaacaccacgattcggtgaagtcctt
gcctggagtaatgataaagaaaacattggaccgtgccctctatcgagcagtagaaacatg
ctaaagagctctcgtcatccatggggtctaaatcgagacactttggacgttctatcatgt
tcagatggttatgatgataggaatcggacatcttttgaccagaaggacatgcgtgatgaa
agaagcaaccatgatagccacgcagatatggactgttatatccaggaacagaattggaat
atcaatccacccctacaaacaagtggtaaaaagccaaaataccggtatatgaaaaacaat
ctccaatgttgtccccgcatctctaacgaaaattgttctcgttttaattctaaaaacaag
ttaaacaccatggcatgggacggcttagagtgtcaaagggataaaacagtccctgaattg
ttggatgataaatccaaatcttctgctgtggaaggagattggagtgggagtgacagtgat
ctaatgattgtggatgacgaagaattcagggatatcctctattgtaaagattcaccagaa
gagaaaaccagagtcacttcaaacttttctaattccgtacaggacgatgtttgccagaat
atgtattctgttggctctagttattgcgagaagtctgaaaaacttcgaaaggcagagcga
gaaatggaaattttcttgtttggatctaacgcagagtccaaaatggaaactaaagatacc
gatacttcaaacggatatactgaatcaaaagagagtggcaaatgtccgaataaagtactg
accttgaacgatagagacattatatatcagaaaccccaggatttcaagcagtatgatgag
atatcaacagatgtgaacttagcacaacaaagttctgcttgtacaccctgttatggtgga
cccagacccaacggaaaaacgtttagtagtatatttgatgctctgttttaa
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integrated database retrieval system
