Magallana gigas (Pacific oyster): 105328977
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Entry
105328977 CDS
T03920
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105328977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crg03021
]
105328977
Transcription machinery [BR:
crg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
105328977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
105328977
NCBI-ProteinID:
XP_034312365
LinkDB
All DBs
Position
7:complement(24305506..24320580)
Genome browser
AA seq
516 aa
AA seq
DB search
MATSSTASQPGSSNSTTQEFTVRVPKDRKKKFKMMKFSTGNDVDFVKMSQTPIRMERENN
YKEFKSAYDIDVAPKFGAGSEYGREQKEEARRKKYGIVSRKYKPEAQPWILKIGKNKEMK
KMKGVREGTITENTSYYIFTQCADGAFEAFPVEEWYTFSPVIKYKYLNSEEAEEEFSRRD
KTLNLFSVMVRNRVRNEDDETNPDEEEKVKTKTKKSKKKEKSEFLITEDEEWANFSDDGN
EDEEDGEGPEEEDDDDPKSKKKGKKNAKGKRNAKHNSDDEAVEESDEGDFDDKEVDYITD
SSSDDEMEDREKKDVYEEKGVDEERGLRKLIDSEEESEEEEDKKSEKAEEEEEDEKAKKE
KKKDDGSDSSSSSSSESDSDIEREENLASVIFMQKGKKERNSPVPQSGAPGTVDGEDKKA
LKRKLESEDVSSKKSRTESPGASGKATSAGITEEAIRRYLMRKPMTAKELLKKFKSKKVN
MSKEEMTSTLTKYLKKIQPEKKTINKKMYFSLKKDG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggccacaagtagcacggcaagtcagccaggatcatctaacagcacaactcaagagttt
actgtgagggtgccaaaagacaggaaaaagaaattcaaaatgatgaagttcagcactgga
aatgatgttgactttgtcaaaatgagtcagacaccgattagaatggaaagagaaaataat
tataaagagttcaagtcagcttatgacattgatgttgccccaaaatttggagctgggagt
gagtatgggcgggagcagaaagaagaggccaggcgcaaaaagtatggaattgtgtcacgc
aaatacaagccggaagcccagccatggattctaaaaattggaaaaaacaaagaaatgaag
aaaatgaagggagtgcgggagggaacaatcacagaaaatacttcctactatatttttact
cagtgcgctgacggggcttttgaggctttcccagtagaggagtggtacacattcagtccc
gtcatcaagtacaaatacctcaactcagaggaggcagaggaagaattcagcagacgagac
aaaactttaaatctgttctcagtaatggttagaaatcgggtcaggaatgaagatgatgaa
actaatcctgatgaagaagaaaaagtcaaaacaaagactaaaaagtccaagaaaaaggaa
aaaagtgaatttttgattactgaggatgaagaatgggctaacttttctgatgatgggaat
gaggatgaagaagatggagagggacctgaagaagaagatgatgatgatcccaagtcgaaa
aagaaaggaaagaaaaatgctaaagggaaaagaaatgccaaacataattctgatgatgag
gcagttgaggaaagcgatgaaggggattttgatgacaaagaggtggattacatcacagac
tcaagcagtgatgatgaaatggaagacagagagaagaaggatgtttatgaagaaaaagga
gtagatgaagagcgaggtctaaggaaactgattgattctgaagaggagagcgaagaggag
gaagataagaaatcagagaaagctgaagaagaggaggaggatgaaaaagcaaagaaagag
aagaagaaagatgatggttcagatagcagtagcagttctagttcagagagtgactcagat
atagaaagggaggaaaacctggcctctgtcattttcatgcagaaaggaaaaaaagagcga
aattctcctgtacctcagtctggagcccctggcacagtggatggagaagataaaaaagca
ttgaaaaggaaattagaatcagaagatgtctcctcaaagaagtccagaacagaaagccca
ggggcgagtggcaaggcaactagtgctggaataacagaggaggcaattcgccgatatttg
atgagaaaaccaatgacggcaaaagaactgctgaaaaaattcaaatctaagaaagtgaac
atgagtaaggaagagatgacaagcacacttacaaagtacctgaagaagattcagcccgag
aaaaaaaccatcaacaagaaaatgtacttttctctcaaaaaagatggatag
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