Magallana gigas (Pacific oyster): 105329029
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Entry
105329029 CDS
T03920
Name
(RefSeq) AP-4 complex subunit epsilon-1 isoform X1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
105329029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105329029
Membrane trafficking [BR:
crg04131
]
Endosome - Golgi transport
Others
AP-4 complex
105329029
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
Motif
Other DBs
NCBI-GeneID:
105329029
NCBI-ProteinID:
XP_034321095
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All DBs
Position
1:46996244..47009101
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AA seq
991 aa
AA seq
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MSDIIEKTLASLPKLFSDGPRGSPGEKTMPQKKIMGRAFQGFLCSVSRCRSLTEEKTYIT
HELKQIQESLNRTDVSQGTVGELLFRLIYCHLLGYDVSFGFIHTIKLAQQGTGLEKRMGY
IAAILLLHQDHELSLLLMNTIQKDLQSTNILDNCIALSAVCHLVQSDGGVISMMLPLVQK
KLQHPRELVRMRAACCILRFIRLTPSYQRHLQDNCRKLLYDKDPGVMSIGVKIQLQLLKS
GLQSIETLTSDLCSILQQIMNRSLPSSFEYHGIPLPWLQIDILRALACLGKENKKNSESM
YPLLRDLLDKFNTKARMSYAVMYECIVTITRIVPHRALLTEASVRVKRFIGSTSYVLKYI
GVKALTHLIAVSPESITDCQMIVVELLEDPDPAIQSKTVDLLFSMANESNVKVVCSKLIE
HLARPRKDFSESELIDRILTLTENRYSLDGVWGYDMVLTILREERSGLPRDMVDRVLNQL
SQVLNYPRDTSRQVPEAVQSLVKKSVQGLFQENCSKELVKIASWVLSECSFLLKNMPDDK
VMSLLQKQFLRESLDTLTRLWILSCVTSLLCGGIVQPGVVTKAVRDMRDRCVSFCDTTQD
YTLLQKLLECERLCAQPLTVDPQGRDLTQFDFTLSYLDDFVCDSLEGETKPYIHKNLRMS
PLKVDPLFSGFAENAGSGSVASDSSGKPTKSATSDSKNVDLKLEGVSRVWGEEGFLEPDT
SVVDSHHAESDQKQRELEKKQELAAALFSGFHSQSKSDAQDKERKDLWSEDVPLNLNSTS
LDWRALSAEESERKGSSTEEMDRQEADRRDPGSVLLDLSDQEKSTEGVLSQDPLSVDDTE
HVQQGHEQSCGESQDSKTTTHQHEQSVGLSVNQKGGGGIQGMNYLSREPPPLSFESFPED
RIQDSSEQFSGLYDGVEEEEDDDSESQGDSVYSLSQLDLDTVRVRGEVRGSGAVCDSDSD
GGSRQGSELSLYSQYQVLEDSHDSEHNEKVS
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatatcatagagaagacgcttgcttcgctacctaagctgttctctgatggccct
cgagggtctccaggagaaaagactatgcctcagaaaaaaataatggggcgagcatttcaa
ggcttcctgtgcagcgtcagtagatgtcgcagtctaacggaagagaaaacttacattaca
catgagctgaagcagattcaagagagtttgaacagaacagatgtttcacagggcacggtg
ggtgaactgctgtttagactgatttactgccacttgttgggatacgacgtctcctttggt
tttattcacaccatcaaactcgcccaacagggcactggacttgagaaaagaatgggctac
atagcagctatccttctacttcaccaggatcatgaactgagccttttgctgatgaacacc
attcaaaaggacctgcagagcaccaacattctagacaactgtattgctctgtctgcagtg
tgccatcttgttcagtcagatggtggggttatttccatgatgttgcctttagtccagaaa
aaattacaacatcccagggagctggtgaggatgagggccgcctgttgtatcctcaggttt
atcaggctgacccccagctaccagcgccatctacaggacaactgtaggaagctgctctat
gacaaagatccaggggtcatgtccattggagtcaaaatacagctccaactgctcaaaagt
ggacttcagagcattgagacgttgacctctgacctctgcagtattctacaacagatcatg
aacagaagtctcccatcatcctttgaatatcatggcattccattaccatggttacaaata
gacattctcagagctctagcctgtcttggcaaagaaaacaagaaaaacagcgagagtatg
taccctctgttgagggatctgttggacaagtttaataccaaggcaaggatgtcatacgct
gtgatgtatgagtgtattgtgactataaccaggatagtgccccacagagctctcctgact
gaagccagtgtcagggtcaagaggttcatcggctccactagctatgtgctcaagtacata
ggtgtgaaagcactgactcacttgatagctgtgagcccggagagcatcacagactgtcag
atgattgttgtagagcttcttgaagacccagatccagccatccaatcaaagactgttgac
cttttgttcagtatggccaatgagagcaatgtcaaggtggtttgtagtaaactgatagaa
catctggctcgtcccaggaaagatttcagtgagtcagaactcatagacaggattctcact
ctcacagaaaatagatacagcttagatggtgtttggggctatgacatggtcctgacaatc
ctgagagaggagcgcagtggtctgcccagggacatggtggaccgagtcctgaaccagctc
tcacaggtcttgaactatccccgagacaccagtaggcaggtaccggaggcagttcagagc
ctggtcaagaaatccgtgcaggggctgttccaggaaaactgctcaaaagaactggtcaag
attgcatcatgggtactgagtgagtgctcatttctgctgaagaatatgcctgatgacaaa
gttatgtcccttctacagaaacagtttttgagagagtcccttgacacattgactcgcctg
tggatcctgtcatgtgtgacgagtctgttgtgtggggggatagtgcagccaggcgtggta
acgaaggcagtaagggacatgagggaccggtgtgtgagcttctgtgacacgacacaagat
tacactttgctacagaagctgctggagtgtgagagactgtgtgcccagccactgacagtg
gacccccagggacgggacctgacacagtttgatttcaccctctcctatttggatgacttt
gtatgtgattctttagaaggggagacaaaaccatacatacacaaaaatctaagaatgtct
ccactcaaagttgatcccctgttttctgggtttgctgagaatgcagggagtggatctgtg
gcatcagattcctcaggaaaaccaacaaagtcggccacctcagactcaaaaaatgttgat
ctgaagctagagggggtcagcagggtttggggagaggagggttttctggaaccggatacc
agtgtcgtggatagtcatcacgcagaatctgaccagaaacagagggaactagaaaagaaa
caagaacttgcagcggcccttttcagtggatttcacagtcagagcaagagtgatgcacaa
gataaagagcggaaagacctgtggtcagaagatgttcctttaaacttgaattctacctct
cttgactggagagctcttagtgccgaagagtctgaaaggaaaggaagctccacagaggag
atggacagacaggaagcagacagacgggatccaggcagtgttctactagatctgtcagac
caagagaaatcaacagagggcgtgttgtcacaggatcctctatctgttgatgacacagaa
catgttcagcaaggacatgaacaatcctgtggtgagagccaggatagtaaaaccaccaca
caccaacatgaacaatctgttggacttagtgtgaaccagaaggggggaggggggatacag
ggaatgaactatttaagcagagaaccgccgccattaagttttgagagtttcccagaggac
agaatccaggacagcagtgaacagtttagtggtctgtacgatggggtggaggaggaggag
gacgacgactcagagagtcagggggacagtgtgtacagtctcagtcagctcgatctggac
acggtccgagtcaggggtgaggtgcgtgggagtggcgcggtgtgtgattcagacagtgat
ggtggcagtagacaggggagtgaactcagtctgtacagtcagtaccaggttctggaggac
agccatgactccgaacacaatgagaaagtcagctag
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