Magallana gigas (Pacific oyster): 105329073
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Entry
105329073 CDS
T03920
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105329073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105329073
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
105329073
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
105329073
NCBI-ProteinID:
XP_011428531
UniProt:
A0A8W8JVJ8
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Position
3
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AA seq
226 aa
AA seq
DB search
MTTHGRTSGWPKGTNPVSYAAKYGITNPSPTLDRPINLYPLTNYTFGTKEPLYEKDSSVP
ARFQRMRDEFEKIGMRRSVEGVLIVHEHGLPHVLLLQLGTTFFKLPGGELNSGEDQVEGL
KRLLTETLGRQDGGTMEWVVEDTIGNWWRPNFEPPQYPYIPAHITKPKEHKRLFLVQLPE
KALFAVPRNYKLVAAPLFELYDNSAGYGPIISSLPQALSRFNFIYN
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaccacacacggcagaactagtggctggccaaaaggaacaaatccagtgtcttatgca
gctaaatatggcataacgaacccttcgcctacgttagatcgcccgatcaatctgtaccca
ttaacaaattacacatttggaaccaaagagccattgtatgagaaggatagctcagtccca
gcacggtttcagcgtatgcgagatgagtttgagaagattggaatgaggcgatctgttgag
ggagtgttaattgtacacgagcacggacttccccacgttctccttctacaactagggacc
acatttttcaaattacctgggggagagttgaattcaggcgaggatcaagtagaaggcttg
aaaagattattaacagagaccctgggaagacaagatggtgggactatggagtgggtagtg
gaggatactatagggaactggtggagaccaaactttgaacccccacagtacccttacatc
ccagcacacatcacaaaacccaaggaacacaaaagacttttccttgtacagctaccagaa
aaggcattgtttgctgttcctagaaattataaacttgtggccgcccccttgtttgaacta
tatgacaacagtgcaggatatgggccaatcatctcaagtttacctcaagctctaagtcgg
ttcaacttcatatacaattga
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integrated database retrieval system
