Magallana gigas (Pacific oyster): 105329214 Help Entry 105329214         CDS       T03920                                  Name (RefSeq) collagen alpha-2(IV) chain   KO K06237   collagen type IV alpha Organism crg  Magallana gigas (Pacific oyster) Pathway crg04512   ECM-receptor interaction crg04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:crg00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     105329214  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     105329214  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:crg04147]     105329214    00536 Glycosaminoglycan binding proteins [BR:crg00536]     105329214 Exosome [BR:crg04147]  Exosomal proteins   Exosomal proteins of other cancer cells    105329214 Glycosaminoglycan binding proteins [BR:crg00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    105329214 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  105329214 NCBI-ProteinID:  XP_065926224 LinkDB All DBs Position 8:complement(22645966..22679692) Genome browser AA seq 1801 aa AA seqDB search MPSERKGDCSCAPCAEKQDVKNRSAFKTYRNHKAMKSWLLLCVVSVFISSSVQVHAQDLK ECGANCQTNNGCKCVGEKGSRGVPGALGPPGPQGLRGYPGMEGLPGQKGQKGESGPLGPL GPKGDRGKMGMPGFPGINGIPGIPGPAGPRGPAGMDGCNGTQGEPGISGFNGQPGAIGPP GLPGTKGEKGEPSVGVAIKGQKGEPGIEGFQGLQGPPGRDGPSGLPGLTGPEGPRGYDGL IGMKGEAGNPGLGKNGQKGDQGEIGSPGPPGPPCDSTKEELQQGNLTQTGPKGNKGERGY SGRDGLPGSEGQKGEQGFPGMKGPPGMDGEKGVPGIAGPRGKQGLPGLPGLPGLKGDRGM DGLPGLNGIQGEKGNPGVPGVKGEKGYQGPPGPSGGEGGDGPEGPKGERGPSGERGYPGL DGLMGLPGSPGRPGPQGGPGTQGLPGPEGPPGPKGNKGDKGNSGLPGIDGLSGQPGLPGE KGNPGPKGNAGVSIPGVKGANGLPGRDGLPGRKGETGFTGLPGIPGNSTRGRPGLPGPKG SKGNPGFPGVSGREGLPGLPGAKGDRGGSCRDCLPGLKGEKGTSGQPGTPGIPGEIGRTG AKGEPGLRGDDGIPGFSGQRGEPGLPGVPGRDGFKGDKGEPYKLESQNIKDMCRKGEPGL PGPAGEQGLNGLPGPQGPRGIDGSPGLPGQKGDRGVDGRDGLPGNPGLPGLIGPKGNPGI GLPGIPGERGIPGDNGLPGLNGMKGDKGIPGETINVNVDLLKGTKGEPGFPGNPGIPGRD GLPGLKGDRGEPGLPGVNGLPGMKGERGFDGIPGEAGPRGLPGPRGDRGSDGPSGSPGFD GRPGEPGPQGLPGVKGESGQPGRDGRSSRGEKGDSGLPGRPGLQGQPGLPGQDGVPGQDG LPGMKGDTGPSGLPGLPGSPGLKGEPGVEGPEGTRGAPGEDGRPGLPGVVGAKGTPGLPG ADGLSGIPGERGEAGFPGQPGAPGLDGPQGPPGLPGERGRDGSPGPKGEPGFVGIPGEPG RDGNDGLPGLQGMKGERGFPGIPGEQGRSGEPGQKGDTGPSGLPGLQGVPGNDGLPGVKG ESGRPGSPGSPGQPGQDGLPGLPGMKGDQGPTGVGIPGESGIPGERGRDGAPGLPGMKGE LGQQGLPGFPGMKGERGFPGPAGQNGIPGNDGLPGMKGNPGFNGNPGRAGLKGEPGLNGI PGREGPKGEAGLPGVPGERGLEGLKGEPGLNGLPGSPGVAGLPGMKGDRGRDGVNGLPGP KGDSGLPGRGGIKGERGSPGFPGPEGREGLPGMKGERGPEGPFGVKGEPGRSIQGIKGEP GIPGEQGRDGFPGMKGNAGLPGQPGLPGMKGDQGLGYPGPQGPKGDSGFNGIPGEQGLTG VPGEPGQPGFPGLKGDSGDRGVPGLPGLQGMPGPEGPPGEPGVPGSPGLPGLKGDAGLPG RDGFEGIKGERGPSGLPGAMGFKGDRGFPGEKGSTGPQASTEGMRIKGEKGETGDRGRAG FPGLPGSKGDAGFPGPKGFPGIPGERGVQGFPGMKGESGFPGQPGIPGEDGFPGAQGATG DPGFPGPPGRTPPSGFLVVRHSQTESEPECPDSTSRLWTGYSLLYIEGNERSHHQDLGWA GSCMQRFSTMPFLFCNSNNVCNYASRNDKSYWLSTNEPMPMMPVRDPELRRFISRCVVCD APANVIAVHSQEMSIPECPIGWKGLWIGYSFAMHTGAGPSGGGQSLSSPGSCLEDFRATP FIECNGSGGTCHFYANKYSFWLTTIDQSQNQFATPVQETLKAGNQRTRVSRCQVCMKTTR P NT seq 5406 nt NT seq  +upstreamnt  +downstreamnt atgccgtcagaacgcaagggggattgcagttgtgcgccgtgcgccgagaaacaagacgtg aaaaaccgtagtgctttcaaaacttacagaaatcacaaagccatgaagtcatggctctta ctctgtgtagttagcgtatttatatcaagctcagttcaagttcatgcccaagacttaaaa gaatgtggagccaactgccagacaaataatggatgtaaatgtgtgggtgaaaaggggtct aggggtgttcccggagcactgggacccccaggacctcagggtctcaggggttaccccggc atggaaggacttcccggacaaaaaggtcagaaaggtgaatcaggcccattaggacctctt ggaccaaagggagacagaggaaaaatgggaatgcctgggtttcctggtatcaatggaatt ccgggtatccctggacccgctggacctagaggacctgctggtatggatggatgcaatgga acacagggagaacccggtatttctgggtttaacggtcagcctggtgcaataggacctcct ggtctccccggtaccaaaggtgaaaaaggagaaccctctgtaggagtcgccatcaaaggt caaaagggagaacctggaattgaaggatttcaaggtttgcagggtccccctggaagagat ggaccatctggattacctggactaactggtcctgaaggcccaaggggatacgatggactg attggtatgaagggagaggcaggaaatcctggtcttggcaaaaacggacaaaaaggagac caaggtgaaataggaagtccaggtccccccggccccccctgtgattctaccaaggaggag ctgcaacaaggcaacttgacccaaacaggacccaaaggaaacaaaggagagaggggttat tctggacgagatggattaccaggatccgaaggtcaaaagggagagcaaggatttcctggt atgaaaggacccccaggaatggatggagagaagggtgtgcctggtatcgctggtccaaga ggaaaacaaggattacctggtctacctggattacctggattaaagggtgaccgtggaatg gatgggctacctggattaaatggaattcaaggtgaaaagggcaaccctggtgtacctggt gtgaaaggagagaagggataccaaggccccccgggacctagtgggggagaaggtggagat ggtcctgaaggtcccaagggtgaacgaggtccctccggagaaagaggttaccctgggctg gatggacttatgggattgcctggatcccctggacgacccggacctcaaggaggtccagga actcagggacttcctggaccggaaggaccacccggacccaagggaaacaaaggagataaa ggaaattctggtttacctggaattgatggcttatcaggccagcctggcttacctggagaa aagggtaatcccggaccgaaaggaaacgctggagtgtcaatcccaggtgtaaaaggagct aatggtctgcctggtcgtgatggattacccggaaggaaaggagagaccggatttacagga cttcctggaattccaggaaactccaccagggggcgccctggacttcctggaccaaaagga agtaaagggaatcctggatttcctggggtgagcggtcgtgagggtctcccaggtcttcct ggagcgaaaggtgatagaggaggctcctgtagggattgtttacctggactcaaaggagag aaaggaacatctggacagcccggtacccctggaatccctggggagattgggcgcactggg gctaagggtgaacccggacttcgtggagacgatggtatacctggattcagtggacagcga ggagaaccgggtcttcctggtgtacccggtcgtgatggatttaaaggagacaagggagaa ccatacaagctggagtcccaaaatattaaagatatgtgtaggaaaggtgagccaggtcta cctggacctgcaggtgagcagggccttaacggacttccaggtccccagggacctcgtgga atagatggttcaccaggactaccaggacaaaagggagacagaggtgttgacggaagagac ggactccctggaaaccctggactcccgggactcattggtcccaaaggaaacccaggaatt ggtcttcctggaattcctggagaaagaggcatacctggagataatggacttcctggattg aacggcatgaagggagataagggtatacctggtgagaccatcaacgttaatgtcgatctt ctgaagggaaccaagggtgagcctggattccctggaaaccccggaattcctggaagagac ggactacctggacttaaaggagacagaggtgagcctggcctaccaggagttaatggtcta cctggaatgaagggcgagcgaggatttgatggtattcctggggaggcaggaccaagagga cttcctggtccgagaggtgatagaggctctgacggaccatcaggatctccagggtttgac ggacgacctggagaaccaggacctcaaggattacctggagtcaaaggagagtctggacag ccaggaagagacggacgttcttcacgtggagagaaaggagattcaggattacctgggcgc cccggacttcaaggtcagccaggtctccccggacaggatggggttcccggacaagatggt ctgccaggaatgaagggagacactggtccctctggacttccaggcctgcctggatcccca ggattaaagggtgaaccaggagttgagggacctgaaggaaccaggggagcccctggagag gacggtcgtcccggactaccaggtgtggttggagctaaaggaacacctgggctccctgga gcagatggcttatcaggtattccaggagagagaggagaggcaggcttccccggacaaccc ggtgcccctggactggacggtccccagggacctcccggactcccaggggagcgaggcaga gacggatccccaggtcctaagggagaaccaggctttgtgggaattccaggagagcctgga cgagatggaaatgatggacttcctgggctgcaaggaatgaagggtgagaggggattccca gggatccctggcgagcagggacgtagtggtgaaccaggacaaaagggtgacactggcccc agcggtctgcctggattacaaggtgtccccggaaatgacggacttcccggagttaaagga gagtctggtcgcccgggatcaccaggatctccaggacaaccaggacaggacggactccct ggactacctggaatgaagggagatcaagggcccacaggtgtgggtatccccggtgagtca ggtatcccaggtgagagaggacgtgatggagcccctggtttacctggaatgaagggagaa ctaggacagcaaggactcccaggattccctggcatgaagggagagaggggtttccctgga cctgcaggacagaatggtattccaggaaatgacggactcccaggaatgaaaggaaatcct ggttttaatggtaatccaggtagagctggattgaagggtgaaccgggtcttaatggaatc ccgggccgtgaagggcctaagggtgaggcagggttacctggtgtgcccggtgaacgcggc cttgagggtctgaagggagaaccaggtctcaatggcctgccaggctcacccggcgtagct ggattacctggaatgaagggagatcgtggcagggatggagtgaacggcttacctggacct aagggagattctggattgcctggaagaggcggcattaagggtgaacggggatcccctggt ttcccaggcccagagggaagagagggcttgccgggcatgaaaggagaaagaggacctgag ggaccatttggagtgaagggagagccaggtcgttccattcaaggaatcaagggagaacca ggaatacctggagaacagggtcgggatggattcccaggaatgaagggaaatgctggtttg cctggacagccaggattaccaggaatgaaaggagaccaaggactaggataccctgggcct cagggtccaaagggagacagtggatttaacggaatcccaggtgaacagggattgactggt gttcctggagaaccaggacaacctggattccctggtctaaagggagattctggagataga ggtgtgcccggtcttccaggattacaaggcatgccaggtcctgaaggacctccaggtgag ccaggcgtcccaggatcacctggattgccaggtcttaagggagatgctggactcccagga cgtgatggatttgagggaataaagggagagagaggaccatctggattacctggagcaatg ggatttaaaggtgatagaggtttccctggagagaaaggttcaactggaccacaagcaagc actgagggcatgagaataaagggagagaagggcgagactggggatagaggcagagcggga ttccccggacttcctggaagcaagggtgatgcaggtttcccaggtcctaagggtttccct ggtattcctggagagaggggtgtgcaaggattcccaggaatgaagggagagtcaggattc cccggacagccaggcattcccggagaagatggtttcccaggtgcccagggagctactgga gacccaggattccccgggcccccaggcaggaccccaccctcaggtttcttggtcgtgcgc cacagtcagaccgagtcggaaccagagtgccctgacagtacaagtcgcctctggactggt tacagcttgctgtatattgaaggaaatgagagatctcaccatcaagacttgggctgggct ggctcctgtatgcagagatttagtacaatgccattcctcttctgtaactccaacaatgtt tgtaattacgcaagtcgaaacgacaaatcctattggctctccaccaacgaacccatgccc atgatgccagtccgcgacccagaactgaggcgattcatcagtcgttgtgtggtctgcgat gccccagctaatgtcatcgctgtccacagtcaggaaatgtctatccctgagtgtccgatt ggctggaagggactctggattggatacagttttgctatgcataccggtgctggtccaagc ggtgggggacagtccctgtccagccctggaagctgtctggaagacttcagggccacaccc ttcattgagtgcaacggcagtggcggtacctgccacttctatgccaacaagtacagcttc tggctgactaccattgatcagagccagaaccagtttgcaactccggttcaagaaacactg aaggctggcaaccagaggacgagagtgtctagatgccaggtctgcatgaagaccacaaga ccttaa

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