Magallana gigas (Pacific oyster): 105329222
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Entry
105329222 CDS
T03920
Name
(RefSeq) endonuclease 8-like 3 isoform X1
KO
K10569
endonuclease VIII-like 3 [EC:3.2.2.-
4.2.99.18
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105329222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crg03400
]
105329222
Enzymes [BR:
crg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
105329222
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
105329222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_GRF
H2TH
Zn_ribbon_RanBP
Fapy_DNA_glyco
zf-FPG_IleRS
CDH-cyt
Motif
Other DBs
NCBI-GeneID:
105329222
NCBI-ProteinID:
XP_065929261
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All DBs
Position
10:complement(34030777..34049716)
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AA seq
569 aa
AA seq
DB search
MVEGPGCKIKGEKIKSKLMRQAVKSVSGNAVDREIKPKKGLVTSQFDVLIGRPLTGVQTL
GKELFMYFGDVCLRVHFLMAGSFRVNGQALDKDYGKLTETPSLQVNFSADVLTFYKSAAQ
IRESVSCSSRYDALHDLDICSPVFNHQRAVTMVMEQSDRQVCDVLLDQTILPGVGNIIKN
EALFDSGIKPSSKVQQLSKELVSHLVRMTRDFSLIFYKCRKTGTNLNQYMKIYNKRKCGQ
CEGKVTITRIGDDSERVTYYCPNCQTNTLKSQVKVHPCKNSLLGWVQSANQKPEINSANQ
SSEVNSANQNNEEDWSCQICTLINSGTKLRCEACMTEREATHTDKSKTGLKRKSSTDFSE
QSVKKVKESNDGPPVRNLDKMESVLSPRLPLGNIPRLPTLTHSGNTDSQKARQTNGNIVG
KTLSKNSSTGIKKPQTGIGGHQNKDVKMNVKAGAPTVSKKMSQDSKGQGASKVPLCPGHS
KPCSMTQTRKKGDNFLRWFFSCGVYPRSKQCKFFQWADEKFPICPNHGKPAAFRTVMKEG
PNNGRKFFACPLPKQKQCGFFEWAEGFEV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaggaccagggtgtaaaatcaaaggagagaaaataaaatccaaactgatgaga
caggcagtaaagtcggtgtcaggcaatgctgtagacagggaaataaagccaaagaaagga
ctggtgacatcacagtttgacgttctgattgggcgaccgctgaccggcgtacagacactg
ggaaaagagctgtttatgtatttcggagatgtctgtttaagggttcattttttgatggcg
gggtcgttccgggtcaacggacaggccttggacaaggactatgggaaactgacggaaact
ccctccctccaggtcaacttcagtgcagacgtactcacattctacaagtctgcagcacag
atcagggagtctgtgtcgtgtagctccaggtatgacgccctccacgaccttgacatctgc
tccccagtgttcaaccaccagagggccgttaccatggtgatggaacagagtgaccgacag
gtctgtgatgtactactggatcagaccatactgccgggagtcggaaatatcatcaaaaac
gaggctttgtttgacagcgggataaagccgagctctaaggttcagcagctgtccaaagaa
ctagtgtctcacctggtgagaatgaccagggacttctctctcatcttctacaagtgtagg
aagactgggaccaacttgaatcagtatatgaagatttataacaagaggaaatgtgggcag
tgtgaaggaaaagttacaataacaagaataggtgacgacagtgagagagtgacttattac
tgtccaaactgtcagaccaatacactcaagtctcaagtcaaagttcatccatgcaagaac
agtctattgggatgggtacaatcagccaatcagaaacctgaaataaattcagccaatcag
agcagtgaagtaaattcagccaatcagaacaatgaggaggattggagctgtcagatatgt
acgttgataaacagtgggacaaaactcagatgtgaagcctgcatgacagaaagggaggca
actcatacagacaaaagtaaaacgggtttgaaaaggaagtcatcaacagatttttcagag
cagtctgttaagaaagtgaaggaaagcaatgatggtccgccagtcagaaaccttgacaaa
atggaatccgtgttaagtcccaggcttcctttaggaaacatcccgcgtcttcctactttg
acacactcaggaaacacagactctcaaaaagcacgtcaaacaaatggaaacattgttggg
aaaacattgtctaaaaattcaagtactgggattaaaaagccacagacaggcattggagga
catcaaaacaaagatgttaagatgaatgtaaaagctggtgctccaacagtttcaaaaaag
atgtcacaagattccaagggacaaggagctagcaaagttcccttgtgtccaggccacagt
aaaccttgctccatgacgcaaacccggaaaaagggagacaattttcttcgctggttcttc
tcctgtggtgtttatccacgatcgaagcaatgcaagtttttccagtgggcggatgagaaa
tttccaatttgtccaaaccatggcaaaccagcggcattcaggaccgtgatgaaggaggga
cccaacaatggcagaaagttctttgcttgtccactacctaaacagaaacagtgcggattc
tttgagtgggcggaaggttttgaggtttga
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