Magallana gigas (Pacific oyster): 105329256
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Entry
105329256 CDS
T03920
Name
(RefSeq) AP-5 complex subunit beta-1 isoform X1
KO
K19022
AP-5 complex subunit beta-1
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crg03400
]
105329256
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
105329256
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GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_N
IFRD
Bac_DNA_binding
Motif
Other DBs
NCBI-GeneID:
105329256
NCBI-ProteinID:
XP_034325451
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Position
6:6391786..6409696
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AA seq
876 aa
AA seq
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MYELLIHKMSEWEDFLNKSRQIVSSGTCEKLFDDNYYVFDVIKLLYKETADEKTKLEQLV
LIEEFSQQAGVQSSNIDQIVESLLDVFHQLIKRGRDVNVSCQILTTLTTILVLYDQLETE
TCQSVVQTLLAIVCNGINMTENRPLRSTACQCLLQLEDSKAGLLWKEKDSLIKLMRQERT
SVYEDYVMLVTQILQNGISAPDDIRSEDREVDRVVAHDSSEYRQLVSQIMDNTSLFSQGG
LWHIVLDLVNIVKNYHEISATIFKPMMLHHMSTFDTPLLHLVVFIQNEFEKEVLTDIEER
QLQNRILAGLNHPSLTPAQRLFYCHWIESLSNVQLDKHESCIRIKDDQQLVFFPSAFDPI
DCQLAKLALLNFCFPSLVKEENGQAAAMLLGGVGYLHKLVWHTGSQRAAKALFRALFSMY
RRHCSKSFSQDINRFLRGLISGFPFFIPQALDFIESLREMTPESPVYLEILQLLHQQVIN
TPQQQAAQYCYFYLQVLKRASLQSEIVPQGTVRFLSYLAENSLSVDEGSWKLGIAILSVC
QNILVCHGTRDLYVEMGDLLFYLMTHYRDTDIRDKARFYYMLITSATDEKICMIIQPTTD
SHFFHTEAISTLLPNNKAKGHSNVKELEKSILSLEKLKVQAETYLDDQYQDADNTSSSIC
DLKTYYSVLKKYKTVLKTVHRLRMTGSPQEVLALCVYFEEDPNCQPLKEIRFSKIDAQVN
YEFDVDIVPKIPLSTRIVTRCEFVDDNQTFRCQLADTAISTEDLIMPLPIEIVSTGDREK
DFHTLWDWMEEDTKKDGSSCVESVTTVQKSLEDFLSSVRPCLKCCQISASAKCVKYGIFL
PPSYHLLMKVTSQRDYVVVRLMTDFYQSLLYIREVV
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtacgagttactaattcacaaaatgtcggagtgggaggatttcctaaacaaaagcaga
caaattgtttcttctggaacatgtgagaaattatttgatgacaactattatgtttttgac
gttattaagctgttatataaggaaactgcggatgaaaaaacaaaattggagcagttggtt
ttaatagaagaatttagtcagcaggcaggcgtccagagttcaaacattgaccaaattgtg
gagtcgctgctagatgtgtttcatcagttgataaagagaggcagagatgtcaatgtttcc
tgccagattctaacaactttaactacaatacttgttctctatgaccagttggaaacagag
acttgtcagtctgttgtacagactcttcttgccattgtttgtaatggtattaacatgaca
gaaaatcggcctctacgttccactgcttgtcaatgcctactgcagttagaggatagcaaa
gcaggattgctatggaaggagaaggactcgctgataaagttgatgagacaggaaagaaca
agtgtgtatgaagattatgtgatgctagtcacacaaattcttcagaatggaatcagtgcc
cctgatgatattagatcagaggacagggaggtggacagagttgtggcccatgattcctct
gagtacaggcagctggtgtcccagataatggacaatacctcactcttctcccagggagga
ctgtggcacattgtgctagatcttgtgaatattgtaaagaattaccatgaaatttctgcc
actatttttaaacccatgatgcttcatcacatgtcaacatttgatacaccattacttcac
ttagtggtatttatacagaatgagtttgagaaggaggttctgactgatattgaggagaga
cagcttcaaaacagaatactggcaggactgaatcacccctcccttaccccagcccagaga
cttttctactgtcactggatagagagcttatccaatgtgcagttggataaacacgagtct
tgcatcagaattaaagatgaccagcagcttgtctttttccctagtgcttttgatcccatt
gactgccaacttgccaagctggcacttctaaatttctgttttccatcactggtaaaagag
gaaaatggtcaggctgctgccatgttgttaggtggagtgggatatctacataaattggtc
tggcacactggaagtcagagggctgctaaagctttgtttcgagctttattttcaatgtat
cgacgccattgcagcaagtctttttcccaagatatcaacagatttttgcgtggactgata
tccgggttcccattctttattcctcaggctttggatttcatagagagcttaagggagatg
actcctgaaagtcctgtttatttggagattctgcaacttcttcatcaacaagttattaat
acccctcagcaacaggctgcacaatattgctatttttacctgcaagtattgaagagggca
tccctgcagtcagaaatagtaccacagggtactgtgaggttcctgtcttacctagcggaa
aattctctcagtgtagatgaaggaagctggaaattagggattgccattttatctgtctgt
caaaacatcttagtatgccatggaacaagagacctgtatgtagagatgggggacttgttg
ttttacttaatgacacactacagagacacagacatcagggacaaagccaggttctactat
atgttaatcacatcagccacagatgaaaagatatgcatgattatacaacctactactgac
tcacactttttccatactgaagccatttctactctccttcctaacaacaaggcaaaagga
cacagtaatgttaaagaacttgaaaaatctatcttgagcctagaaaaattgaaggttcaa
gctgaaacatatcttgatgatcaatatcaagatgcagacaatacgagctcatcaatttgt
gatttaaagacttactacagtgtcctaaagaaatacaaaacagtattaaaaacagtccac
agactcagaatgacaggaagtccccaggaagttctagccctgtgtgtatactttgaagaa
gatcctaattgccagcctttaaaagaaataagattctctaaaattgatgcacaagtgaat
tatgaatttgatgttgatatcgtacctaaaattccactttcaacaagaatagttacaagg
tgtgaatttgttgatgataatcaaacctttagatgtcagttggctgatacagctatctcc
acagaggacttgatcatgcccctaccgatagagattgtgtccacaggggacagggaaaaa
gacttccacaccctgtgggactggatggaagaagacactaaaaaagatgggtcttcttgt
gtcgaatctgtgacaactgtacagaaatccttggaagactttctttcttctgtgagacca
tgtttgaaatgctgtcaaatttctgcaagtgcgaagtgtgtaaagtatggaatattccta
cctccgagttatcatcttttgatgaaagtgacttctcagcgggactatgttgtagtgaga
ttaatgacagacttctaccagagcttattatatatcagagaggtagtctga
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