Magallana gigas (Pacific oyster): 105329258
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Entry
105329258 CDS
T03920
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105329258
04121 Ubiquitin system [BR:
crg04121
]
105329258
Enzymes [BR:
crg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105329258
Membrane trafficking [BR:
crg04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
105329258
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105329258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
Zn_ribbon_19
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
HypA
zf-ANAPC11
zf-RING_4
zf-RING_5
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
105329258
NCBI-ProteinID:
XP_011428752
UniProt:
K1PE41
LinkDB
All DBs
Position
6:6383278..6389898
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AA seq
289 aa
AA seq
DB search
MAEAAIERQSETSKFYCHSCSEEINPKPDFTCPKCENGFIEELTEDLAETPSPQPAQQLD
PAAQFTELWGRAFLESFENHSGSGSSNATQNGVESESEEEEGRPRTRGHGLRPLTRISVR
TGAGRNRPMSQPQYLHGLLQLFVDRLTGEMGQPMNFMTLHGNPADYAWGVGGLDNIITQL
LNQLEGSGPAPAEKSKIDSLPNVKVTQPQVDNILQCSICMEDFELHENVKKLPCEHHYHK
VCIVTWLEMHGTCPVCRIDLNGVDNSLKNDDNLLSELENIQNDQPEPPE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgccattgaaaggcaatccgagacgagcaaattttactgccatagctgc
tcagaagaaataaacccaaaaccagattttacgtgtcccaaatgtgaaaatggatttata
gaagaactaactgaagatttagctgagacccccagtccccaaccagctcaacagcttgat
cctgctgcacagtttacagaactatggggaagagcctttttagaaagttttgaaaatcat
tctggatctggttcctcaaacgccacacagaatggagtggagtccgagtcggaagaggaa
gaagggcgaccgaggacgcgtggccatggcctgagaccactgacccggatatctgtcaga
acaggggcggggaggaaccgaccaatgagtcaaccacaatatttacatgggcttttgcag
ttatttgttgatagattaactggggaaatgggacaacccatgaactttatgacacttcat
gggaaccctgctgattatgcttggggtgtaggaggtctcgacaacattataacacagttg
cttaatcaattagagggatctgggccagcaccagctgaaaagagtaaaatagattcatta
ccaaatgttaaagtaacccagcctcaagttgataacattttacaatgttcaatatgtatg
gaagattttgagttacatgaaaacgtgaaaaaattaccatgtgaacaccattatcacaag
gtgtgcattgtcacctggctagaaatgcatggaacctgtcctgtgtgtcgaattgaccta
aatggtgttgataattctctaaaaaatgacgacaatttactctcagagttggagaacatt
cagaatgaccagcccgaaccaccagagtga
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