Magallana gigas (Pacific oyster): 105329377
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Entry
105329377 CDS
T03920
Name
(RefSeq) phenylalanine--tRNA ligase, mitochondrial isoform X3
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105329377
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
crg01007
]
105329377
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crg03016
]
105329377
Enzymes [BR:
crg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
105329377
Amino acid related enzymes [BR:
crg01007
]
Aminoacyl-tRNA synthetase
Class II (U)
105329377
Transfer RNA biogenesis [BR:
crg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
105329377
Prokaryotic type
105329377
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
FDX-ACB
Motif
Other DBs
NCBI-GeneID:
105329377
NCBI-ProteinID:
XP_011428903
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All DBs
Position
3:complement(40878284..40893759)
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AA seq
455 aa
AA seq
DB search
MGRNFSCEEKMMWKRIQCFAKLSGYHIYLWERQSSLSLPISLSRKYSVKTSCDVDTLTVL
GNSYNTDKITNVTPKILEKMGKNLHCKHNHPLNLITRRIENYFNNNYRNNWRAPMFSKFD
RISPVVTLTQNFDSLLVPSDHPSRALSESYYLNSEYMLRAHTSAHQSDLIKQGLDAFLVL
GDVYRRDTVDASHYPVFHQMEGVRLFSKQELFSHLGDTSRVTFFENGSRDATKQERHTVE
TSLCLEENLKNTLRNLANNLFGDDVEMQWVDAYFPFTHPSWELEIKYQGEWLEVLGCGIV
EQEILSSAGADSRVGWAFGLGLERLAMRLYSIPDIRLFWSEDSRFLDQFNVEDPNTKITY
KPFSKQSPVINDVSFWVPDDFSENDFYDIVRNIGGDIVENVELFDNFVHPKTKRKSKAYR
ITYRHMERSLTKSEANEIHSGIVAAGVQQLGIQER
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaaatttttcttgtgaagagaaaatgatgtggaagaggatacaatgctttgct
aaactaagtggatatcacatatatttatgggaaagacagtcttctttgagtcttcctatt
tcattatccagaaaatattctgttaaaaccagctgtgatgtggacacattgactgtattg
ggcaactcatataacactgataaaattacaaatgttactccaaagattttggaaaagatg
ggaaaaaacttgcactgtaaacataaccatcctctgaatttgataactcgaagaatagaa
aattatttcaacaacaactacaggaataactggcgagctccaatgtttagcaagtttgat
cgaataagtccagtagtgaccttgacacagaattttgacagtttactggtcccctcagat
caccccagcagagctttatcagaaagctactacctgaattctgaatacatgctgagggca
cacacttcagctcatcagagtgacctaattaaacagggactggacgcctttctggttctg
ggtgatgtgtatcgcagagacactgtcgatgccagtcactatcctgtgtttcaccagatg
gaaggagtccggcttttttcaaaacaagaacttttcagtcatttaggagatacttcaagg
gtgacattttttgaaaatggatcaagagatgcaacaaaacaagaaaggcacactgttgag
acgtctttgtgcttagaagagaatctgaagaatacattgaggaatctagcaaacaatcta
tttggagatgatgtggagatgcagtgggttgatgcctacttcccgttcactcatccgtca
tgggagttggagatcaagtaccaaggagaatggttggaagtgcttgggtgtggaattgta
gaacaagaaattctctcatcagctggagctgatagtcgagtgggctgggcctttggactg
ggcctggaaagactagccatgaggctgtatagtataccagatatcagactattctggagt
gaagattccagatttcttgaccaatttaatgtagaggacccaaacacaaagatcacatac
aagccgttcagtaagcagtcccctgttatcaatgatgtctcgttttgggtgccagatgac
ttttctgaaaatgatttttatgacattgtgcggaatatcggtggtgacattgtggaaaat
gtagaactgtttgacaactttgtccatcctaaaacaaagcggaaaagcaaggcctatcgt
ataacctatcgtcacatggaaagaagtctgacaaagagtgaagccaacgagattcacagt
ggcattgtggcagcaggtgtccaacaactcggaatacaagagcgataa
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