Magallana gigas (Pacific oyster): 105329452
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Entry
105329452 CDS
T03920
Name
(RefSeq) cytoplasmic FMR1-interacting protein
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105329452
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105329452
Factors involved in mRNA localization
Other mRNA localization factors
105329452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
BP28CT
Motif
Other DBs
NCBI-GeneID:
105329452
NCBI-ProteinID:
XP_011429009
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All DBs
Position
2:45332655..45347249
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AA seq
1265 aa
AA seq
DB search
MSVPAVEKVELSEALGKVNSLGGLLHCGSSPSIEGMSLTVQYQVNFDTNFEDRNAYVTGV
ARYIEEATVHADMNKLIEEAQEYAVMLYTWRSCSRGLPQIQSNNQPNREEIYTKIVEVLE
PMMSKLKDFMKFTTNSIHKFGEEIKRLCHPARKNDFISEAYLLTIGKFINTFAELNELTN
MKASVQNDYAAYRRATQFLRLMLDPQALAESQNLSLFLATQNKIRDLLKQALETTPGYEE
LLADVVNISLHMYENKLFLEPGEKNMLIKVMAFGLFLMDNKENSIYKMESKKRLNLSKID
KILKQMDVVPLYGDMQMKPYFYITKSLNFDSSRWSHCESSQPSPQSQILSSLESLRESHT
EYVSELARRSNEKMTSSDKSPVTDAENKEMYDLALRGLTLLSSWTQRVMELYCWKLLNPT
DTHTTPDCPKDAEEYERSTRYNYSSEEKFAVVEVIAMIKGLQLLMARMEPEFLPAIRRHI
YSSLQDFAQIFLREPLRRAAKKKNDLLKMVILSVRDSCIDWKDGVEPESDPAIKGKKDPE
TGFPISVPRKCVAPSATQLYMVRTMLESITDRSTVGVKRSVKKELESQQVTAINQFLKQS
FYWNYLLNFNKSLHACGDLSQLWFREYFLEMTMGKRIQFPIEMSMPWILTDHVLNTKEPS
MMEYILYPLDLYNDSAQYAIMKFHRQFLYDEVEAEVNLCFDQFVYKLSEQMFAYYKHLAG
SIMLDKSFRAECAKKGHKIPYPVANRYHTLLKQQHVQVLGRSIDLKHLIGQRINASLLKS
LDIAISRFEAGDLTGIVELEKLIEVNKLTYKLMKDLLPLDDFDSMLNEANNKVTGPFGRI
TLHVFWEINYDFLQHYCYNAATNRFIKATFLIAPEQCDREKAPSPSHAFLWGTKALTTAY
SSIFKPFHGFIGPPHFRSLCRLIGYHGIALVVEELLKVVENILKGTLLDYVQALMTLMPE
KCKLPRYDYGSPGIAQFYSEMLSDIIQYPDLRTDVFQSFREIGNAILLTLLMEQALTQEE
MCDLKQAAPFQNVIPKPFIPIKEGDDRKQKEKELREALQALETKYASQQIVPVIGRCGNA
QQSDLVASCDLLTRERLCCGLSMFEVVLNKIKTFLEDKTWHGQHPKNDVINIDECTEFHR
LWSALQFVYCMPIRENEYSIEELFGEGLNWAGCALIVLLSQQRRFEALDFCYHVLKVNRV
DQKQGTIMGHQLSSLVGRIRWFQVLNTQIFDIFKKYLYASELPENAVENITCFTPPIHPS
CATPI
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtacccgctgtagagaaagtggagctttcggaggccctcgggaaggtgaattcc
ctggggggtctcctccactgtgggagttcccccagcattgagggcatgtcactgaccgta
cagtatcaggtgaattttgataccaactttgaagacaggaatgcttacgtcacaggtgtg
gccaggtatatcgaagaagcgactgtacacgctgacatgaacaagttaatagaggaagca
caagagtatgctgtcatgttgtacacgtggagatcttgttcgaggggtttaccacagata
caaagcaacaaccagccaaacagggaagagatttacacaaaaatagtggaggtcctcgag
ccaatgatgtccaagctaaaggacttcatgaagtttacaacgaacagcatacacaagttt
ggggaggaaatcaaacgactctgccaccccgccaggaaaaatgattttatatcggaggca
tatttgctgaccattggaaagttcattaacacttttgcagagctgaatgaactaaccaac
atgaaggctagcgtccaaaatgattatgctgcgtacagacgagctactcagtttttaaga
cttatgttggacccgcaggctctagccgagtctcagaatctgtccttgttcctggcaact
caaaacaaaatccgggatctgctgaagcaggcgttggagacgaccccggggtacgaggaa
ctgttggcggacgtggtcaacatttcgttacacatgtacgaaaacaagctgttcctggag
ccaggcgagaaaaacatgttaattaaggtgatggcttttggtctttttctaatggacaac
aaagaaaatagtatctacaaaatggagagcaaaaaacgactcaacctgtctaagatagac
aagatactcaagcaaatggacgttgtgcccctgtacggtgatatgcaaatgaagccgtat
ttctatataacaaagagtctgaactttgactcctcgaggtggagtcattgtgaatcatcc
cagccgagcccccagtcccaaatcctgtccagtttggaatcactcagggaaagtcacacg
gaatatgtgtcagaattagcgcggcggagcaatgaaaaaatgacgtcctctgacaaaagc
ccagtcaccgacgcagaaaacaaggagatgtatgacctggcactgcgcggattgaccctg
ctgtcctcctggactcaaagggtcatggaactgtactgctggaagttgttgaatcccacg
gacacacacaccactcctgattgtccaaaggatgctgaggaatatgaaaggtccacccgt
tacaactacagcagtgaggagaagtttgctgtggtggaagtgatcgccatgattaagggg
ctacaactcttgatggctaggatggagcccgagtttctccctgcaatcagacgacacata
tactcctcactccaagatttcgcccagatatttctacgagagcctttacgacgagcagcg
aaaaagaagaatgatctccttaaaatggtaatattgtctgtccgggattcgtgtatagat
tggaaggacggcgtagaacccgagtcggatccggcgatcaaaggaaagaaggacccggaa
actggattcccgatatccgtaccaaggaaatgtgtggccccatccgcgacccagctgtac
atggtgagaacaatgctggagtccatcacagaccgaagtactgtgggggtgaagaggtca
gtcaagaaggaactggagagtcaacaagtgaccgccatcaaccagttcctgaagcagtcc
ttctactggaactacctcctcaacttcaataagtcgcttcatgcctgcggtgatctctca
caactgtggttcagagaatacttcttggagatgacaatgggaaagcgaatacagtttccg
atcgaaatgtccatgccctggattctgactgaccatgttctaaataccaaagagccttca
atgatggagtacatactgtatcccctggatctgtacaacgatagcgcccaatacgccatc
atgaaattccacagacagttcctttatgacgaggtggaagcagaggtgaatttgtgtttt
gaccaattcgtgtacaaactaagtgaacaaatgtttgcctattataaacaccttgcgggc
agcattatgctggacaagagctttcgtgcagagtgtgcaaaaaagggacacaagattcca
tatccagttgcaaatcggtatcataccttattaaaacaacagcatgtacaggtactcggt
cgatccattgacttgaaacacctaattggtcagcgaatcaacgcttccctactgaaatct
ttggacatcgccatatcgaggttcgaggctggtgatttgacaggcattgtggaacttgaa
aaactcattgaagtcaacaagttgacgtataaactgatgaaagacttgcttccattggat
gattttgacagcatgttgaacgaagcaaacaacaaggtgactggtccgtttggacgtatc
actcttcacgtgttctgggaaatcaactatgatttcttacagcattactgttacaatgct
gccaccaacaggtttatcaaagcaacgtttttgattgcgcctgaacagtgtgatcgagag
aaggcacctagtccatcgcatgcctttttgtgggggacaaaggctttgacaacagcgtat
agcagcatctttaagccgttccatggattcataggaccacctcacttccggtctctatgt
cgtctgatcggttaccatggaatagctctggttgttgaggaattactcaaagttgtggaa
aatattctgaagggtactttgttggattacgtccaggctctaatgactttgatgccggag
aaatgtaaactgccaagatatgattatggatccccaggtatcgcacagttttacagcgaa
atgttgagcgacataattcaatatccggatcttcgcaccgacgtctttcaaagtttccgc
gaaatcggcaacgccatacttttaacattactgatggaacaggcattgacacaggaagag
atgtgcgacttaaaacaagctgccccgttccagaacgtgattccaaaaccattcatccca
attaaagagggtgacgacagaaagcaaaaggaaaaggagctacgtgaggccttacaagcg
ctagagaccaagtatgcctcacagcaaatcgttccggtcatcggccgttgtggtaatgcc
cagcaatcggatttggtggcttcgtgtgatctgctgaccagagaacggttgtgctgtggc
ttatcaatgtttgaagtcgtcctcaacaagatcaaaacatttctggaggataagacgtgg
catggtcaacatcccaaaaatgacgtcatcaacattgacgagtgtactgaattccaccga
ctgtggagcgccctgcagtttgtgtactgtatgccaatccgggaaaatgaatattccatt
gaagaattgttcggggagggcctgaactgggcaggttgcgccctcattgtcctcttgtca
cagcaacggaggtttgaggcgctggatttctgttaccacgttctcaaggtcaacagggtg
gaccagaaacagggtaccataatgggccaccaactatccagcctggtgggacgaattaga
tggttccaggttctcaatacacagatatttgacatcttcaagaaatacttatatgccagt
gaactaccggagaacgccgtagagaacattacgtgcttcaccccgcccattcacccatcg
tgtgccacgcccatctga
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