Magallana gigas (Pacific oyster): 105329468
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Entry
105329468 CDS
T03920
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7 isoform X1
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105329468
Enzymes [BR:
crg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105329468
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
105329468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR55
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_IP5PC_F
NBCH_WD40
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_5
Beta-prop_SPT8
WD40_like
zf-C3HC4_4
Beta-prop_IFT140_2nd
zf-TRAF
Beta-prop_IFT122_1st
Prok-RING_4
Beta-prop_Nup120_160
Sina_ZnF
DUF641
zf-RING_2
PKcGMP_CC
zf-RING_6
WDR90_beta-prop_4th
Beta-prop_WDR75_2nd
DUF1664
XLF_CC
CorA
LRRFIP
HMMR_N
UPF0242
Motif
Other DBs
NCBI-GeneID:
105329468
NCBI-ProteinID:
XP_011429036
UniProt:
A0A8W8NTP9
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All DBs
Position
7:complement(14103679..14112877)
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AA seq
688 aa
AA seq
DB search
MAQQNFQEYDPLDDYARRTNSYRYFSSNYGENHPGTQASHPGNEESSSSCNSSPVRNENR
NSQLINNSMALQEGKMVTHQVSYNDTGQRLPGFGEPSPRLADSAMGFGDVLQNRAPMSPS
HRKSLTSLHHSETEVWDIMVFVEPPSKSLFCKMCNKVYKDPVMVTCGHSYCKRCVTRQSE
GTCPIDNQTIAVVVANIAVSEQIGEMFIHCRHGCRLSEDGQTYELDPTRCQATVKVATRG
EHEEACDYMMVECPNHAGCPQLLRKDLEDHIKTCCNVKCPHHKYSSCEFTGTQEELIIHL
KMCKYEGMKDFLGHMEEKVGELQESLEEKDQEINFLRSMLGKLSERLENLEKTAEIKLEI
IERNQSNLLNEVVENRKERALLMNEVEHITSALNERNTVIGVYDPQQMFRCRGTFVGHQG
PVWCLTEYAEFLFSGSSDKTIKVWDTGNNYRCLKTMEGHTGIVLALCTCGNKLYSGSQDC
RIMVWNIENFEKEKSVEAHENPVCTLTSAKNMLFSGSLKVVKVWDAQTMELKKELTGMNH
WVRALVATQNYLYSGSYQTIKIWDLDSLEVVHNLETSEGSVYSLAVTTHHILCGTYENVI
HVWELSSKELVVTLKGHTGTVYSMAVLHTSSGTKVFSASYDRSLRVWSMDNMICTQTLLR
HQGSVACLAVSRGRIFSGSVDSTVKVWQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacaaaattttcaagaatacgatcctcttgatgattatgctcgaaggacgaat
tcttatcggtatttttcctccaattatggagaaaatcaccctggcacacaagcatcacat
ccaggtaatgaagagtcttcctcttcatgcaactcatcgccagtcaggaatgaaaataga
aacagccaactgataaacaacagcatggcattacaggagggcaagatggtcactcaccaa
gtgagctacaatgacacaggtcagagactcccagggtttggagaaccaagccccaggcta
gctgactcagccatggggttcggagatgtacttcagaatagagctcccatgtcacctagc
cacagaaaatctctcacatcacttcatcattccgaaacagaggtttgggatataatggtt
tttgtggaacctcccagtaaaagtttgttctgcaagatgtgcaataaagtttataaggac
cccgtgatggtcacatgtgggcactcctactgcaaaagatgtgtaacaagacaaagtgaa
ggaacatgtccaatagacaaccagacaatagcggtcgtcgtcgctaacatcgctgtgtcg
gaacagatcggggagatgtttattcactgtcggcatggctgtcgactgtcagaggacgga
cagacctacgaactggatccaacccgctgtcaggccaccgtcaaagtcgccaccagaggg
gaacatgaagaggcctgtgattacatgatggtcgagtgtccgaatcatgccggctgtcca
cagttactgagaaaagacctagaagatcacatcaaaacctgttgtaatgtcaagtgtcct
caccacaaatacagtagttgtgagttcactggaacacaggaggaactaatcatacacctc
aagatgtgtaagtacgagggcatgaaggactttctgggtcacatggaggagaaggtggga
gagcttcaggagtctctggaggagaaggaccaggaaatcaacttcctgcgatccatgctc
gggaagctgtccgagagactggaaaacttggaaaaaacggccgagatcaaactagaaatt
attgagcggaatcagagtaatttactcaatgaagtcgtggaaaatcgcaaggagagggct
cttcttatgaatgaggtggaacacattactagtgcattaaatgagcggaatacagtgatc
ggagtctatgacccacagcaaatgtttagatgtagaggaacctttgttggacaccagggg
cctgtttggtgtctaacagagtatgcagagttcctattcagtggttcctctgataaaaca
ataaaggtttgggacacgggaaacaactacagatgtctgaaaacaatggagggccacaca
ggcatcgtactggccctgtgtacctgtggtaacaaactgtacagtgggtcacaggactgt
aggataatggtctggaatattgagaactttgagaaggagaagtcggtagaagctcatgag
aatcctgtatgtactctgacctcagccaaaaacatgttgttcagtggatccctgaaggtt
gtcaaggtttgggatgctcagacaatggagcttaaaaaagaactgactgggatgaaccac
tgggtcagagctcttgtggctacccagaattacctgtacagtggctcctatcagaccata
aagatctgggacctggactcattagaggttgtacataatctagagacgtcggagggcagc
gtatacagcctagctgtcacaacccaccacatcctgtgcggcacctacgaaaatgtcatc
catgtgtgggagcttagttcgaaagaattggttgtgaccttgaaaggtcacacggggact
gtttacagtatggctgtccttcacacttcctcaggaaccaaagtgttcagtgcttcgtac
gacagatcactacgagtatggagcatggacaatatgatttgtacacagacattattaaga
catcaaggcagtgtggcatgtttagctgtttctcgtggtagaatattctctggatcagtg
gacagtacagtaaaggtgtggcagtga
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integrated database retrieval system
