Crassostrea gigas (Pacific oyster): 105329640
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Entry
105329640 CDS
T03920
Name
(RefSeq) tubulin alpha chain, testis-specific
KO
K07374
tubulin alpha
Organism
crg
Crassostrea gigas (Pacific oyster)
Pathway
crg04145
Phagosome
crg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105329640
09142 Cell motility
04814 Motor proteins
105329640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105329640
03036 Chromosome and associated proteins [BR:
crg03036
]
105329640
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
crg04812
]
105329640
04147 Exosome [BR:
crg04147
]
105329640
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105329640
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
105329640
Cytoskeleton proteins [BR:
crg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
105329640
Exosome [BR:
crg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105329640
Exosomal proteins of other body fluids (saliva and urine)
105329640
Exosomal proteins of colorectal cancer cells
105329640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
MSP
Motif
Other DBs
NCBI-GeneID:
105329640
NCBI-ProteinID:
NP_001292302
UniProt:
Q5NT89
LinkDB
All DBs
Position
LG7:55518745..55521358
Genome browser
AA seq
452 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFASLLTERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALSVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKDGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEGEAEKEGGDEY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatatctattcatgttggacaagctggtgtccagattggaaatgcctgc
tgggagctgtactgcttggagcacggcattcagccagatgggcagatgccaagtgacaag
acaattggagggggagatgattcattcaacacctttttcagtgaaactggtgctggcaag
catgtaccaagggctgtatttgtagacctggagcccacagttgttgatgaggtgcgcaca
gggacgtaccgccaacttttccatccagaacagctgataactggaaaagaggatgctgcc
aacaactatgcaagaggtcactacaccattggaaaggaaattgtggacttggttttggat
cgcatcagaaaattggctgaccaatgcactggtcttcaagggttcctgatttttcacagc
tttggaggaggaactggttctggatttgcctcccttctgacggagagactgtctgttgat
tatggaaagaagtccaagcttgaatttgccatttaccctgctcctcaggtatctacagca
gtagttgagccatacaattccatccttaccacacacactactctggagcattccgactgt
gccttcatggttgacaatgaggctatctatgatatttgccgaaggaacctggacattgag
aggccaacatacaccaacttgaaccgcctgattggtcagattgttagttcaatcacagcc
tcccttcgatttgatggagccttgagtgtggacctgacagagttccagacaaatcttgta
ccttacccacgtatccactttccattggtgacctacgctcctgtcatctctgcagagaag
gcctaccatgaacagctgtcagtagcggaaattaccaatgcgtgctttgaaccagcaaat
caaatggtgaaatgtgatcccagacatggcaagtacatggcttgttgcatgctgtacaga
ggggatgttgtacctaaggatgtcaatgctgccattgccaccatcaagacaaagagaacc
attcagtttgtggattggtgtcctactggtttcaaagatggcatcaactaccagccacca
actgttgttcctggaggtgaccttgccaaggtacagagagctgtctgcatgttgagtaac
accactgccattgctgaggcctgggctcgtctggatcacaagtttgacctgatgtatgcc
aagcgtgcctttgttcactggtatgtgggagagggaatggaagaaggtgaattctctgag
gcccgtgaagatctggctgccttggagaaggattatgaagaagtgggtgtggattctgtt
gagggagaggctgaaaaggaaggtggtgatgagtactaa
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