Magallana gigas (Pacific oyster): 105329658 Help Entry 105329658         CDS       T03920                                  Name (RefSeq) E3 ubiquitin-protein ligase AMFR   KO K10636   E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36] Organism crg  Magallana gigas (Pacific oyster) Pathway crg04137   Mitophagy - animal crg04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:crg00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     105329658  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     105329658  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:crg04121]     105329658 Enzymes [BR:crg01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)      105329658 Ubiquitin system [BR:crg04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     105329658   Multi subunit type E3    ERAD complex     105329658    LMBR1L-GP78-UBAC2 complex     105329658 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_SYVN1_N zf-RING_2 CUE zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 G2BR zf-RING_UBOX zf-rbx1 zf-RING_5 zf-RING_11 zf-ANAPC11 Prok-RING_4 RING_XB3-XBAT31 zf-RING_16 zf-RING_Vps41 Plk4_PB2 zf-C3HC4_4 PHD_NSD zf_RING_Vps8_fungal Motif Other DBs NCBI-GeneID:  105329658 NCBI-ProteinID:  XP_011429293 LinkDB All DBs Position 3:complement(29204509..29240512) Genome browser AA seq 667 aa AA seqDB search MPVILLERIPLPSLQTYTSVSVLVLSVALYYAYHTVTTVDINSIHELDFGDGVTVEPVAD DEVLNEHHDMVNISLPYDSVGWNMFHILTSEVWCVWILVNSAYCCLILLGKAIQKLVFGE LRVSEEQHLRDKFWNFLFYKFIFIFGVMNVQTLEEVVSWVAWFTILGFFTLLTQLSKDRF EYLSFSPIAARGVHVKLLCLLFVILLCSFALLFLSGYVGLQAGPTIFAFLAAECLLLGIR ALYVVVRYVIHLWDMTVSSVWENKSMYIYYTELTFELSALAVDFAHHLHMLLWGNIFLSM ASLVICMQLRYLFYEFKRRINRHKNYRRVVQNMEARFPMATKEELQIHNDNCAVCWERMD SARKLPCGHFFHNSCLTSWLEQDTSCPTCRTSLSEGQQVDPNSNVPDERGAAPPQPPQQQ PQNMFTNHFFHFDGSRYVSWFPSFSVEVTHTQLLPGGRQRPIQTSQLDSMARQVQSVFPH IPTNVILEDLRNTRSVDFTIENILEGRVQVPPPGLTTMAALTDSEEGSDDSDSPSTPSQP SPRALQLARSEEGDERVGTSEGAGGVSSIMDDNVPFLMETVPQPSDEAHFTTGSRFSKST TERESMLQSRKEQMLQNARKKYLNRQTNSSKEAASQIDDTGVTSETNAADQVQLRHRNES TFQETQR NT seq 2004 nt NT seq  +upstreamnt  +downstreamnt atgccggtgatcttactggaaaggataccgctgccgagccttcagacttacacgtctgta tccgtcctagttttatctgttgcgttgtactatgcctatcacactgtcaccacagtggac attaactctatacatgaactggatttcggagatggtgtcacagtagaaccagtagcagac gacgaagtcttgaatgagcatcatgatatggtcaatatcagcctcccctatgacagtgtg gggtggaacatgtttcatattctgaccagtgaggtctggtgtgtatggatcctggtcaat tcggcatattgctgtttgatacttcttggaaaagctatccagaaacttgtgtttggggaa cttagagtgtcagaggaacagcatttgagagacaagttttggaacttcctgttctacaaa tttatattcattttcggagtgatgaatgttcagacgctggaggaggttgtatcttgggtc gcctggttcaccattcttggcttcttcacccttctgactcagctgtccaaggacagattt gaatatctatccttctccccgatcgcagcccgaggagtccatgtcaaacttctgtgcctc ttgtttgtaatcctgctgtgtagctttgccttactcttcctcagtggatatgtgggcctc caggcaggccccactatttttgccttcctagctgcagagtgccttctgttgggaatcagg gctctgtatgttgttgtaagatatgtaatccatttgtgggatatgacagtgtccagtgtt tgggagaacaagtctatgtacatctactacacagagctgacctttgaactgtctgcttta gctgtagactttgctcatcacctccacatgttgctgtggggaaatatttttctgagtatg gctagcctagtaatctgtatgcagctgaggtacttgttctatgaatttaagagaagaatc aaccgccataagaactacagaagagtggtccagaacatggaagcaagatttcctatggca actaaggaagaactacagattcacaatgacaactgtgctgtgtgctgggaaaggatggac tctgcaagaaaactaccctgtggccatttttttcataattcttgtttgacgtcgtggctg gagcaggacacttcctgtccgacttgccggacctccctgagtgagggacagcaggtggac cccaacagcaatgtccccgacgagcggggagctgcaccccctcaaccaccccagcagcag ccccagaacatgttcactaatcactttttccattttgatggatctcgatacgttagctgg ttcccgagtttctcggtggaggtgacacacacccaacttttacctggaggcagacaaagg cccatacaaacctcgcagttagatagcatggctcgccaagtccagtctgttttccctcac attcccacaaatgtcatccttgaggacctgaggaataccagatctgtggacttcactata gaaaacatactggagggcagagttcaagtgccacctcctgggttaaccacaatggctgcc ttgacggactcggaggaaggaagtgatgacagcgactctccgtccactccctcccagccc tccccccgggctctacagctggcccgatcagaggagggggatgagagagtcggaaccagt gagggggctggaggggtcagcagcataatggacgacaatgtcccattcctaatggaaaca gttccacaaccaagtgatgaagctcacttcacaacgggtagccgattctcaaagtcaaca accgagagagaatccatgttacagagtaggaaagaacaaatgttacagaatgcaagaaag aaatacttaaaccgacaaacaaattcatcaaaggaggcagcatctcaaattgatgacacc ggagtgacatcagaaacaaatgcagcagaccaggtgcagcttcgtcacagaaacgagagc acatttcaagagactcagcggtga

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