Magallana gigas (Pacific oyster): 105329677
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Entry
105329677 CDS
T03920
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105329677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105329677
Enzymes [BR:
crg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105329677
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
HECT type E3
105329677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
VMAP-M8
Motif
Other DBs
NCBI-GeneID:
105329677
NCBI-ProteinID:
XP_011429324
UniProt:
K1QNF6
LinkDB
All DBs
Position
7:complement(35819633..35829765)
Genome browser
AA seq
1069 aa
AA seq
DB search
MYSFEGDFRRKPVQSLRGASKKEQTDSLLTRAKAERERREEIRQRHSSSLKIQSAYRGHV
VRKRQREILRDEYDKLMSRGIADPASIFNAIRRLCYFYRTDSGKDQDRLIQLCQTVIKQK
DMIKSSVTQSGKSGVFLLQHLLLLCLKNLQNASDTRSWGPPMRMLEIFTSVDTFKDKKKL
LGNIWIFLIKKEYFGSMRHLLEAKVPQSLDKSPTPPTPQAESIFNMIISPIQFAVMSKDK
EFSDLVLKSACFYLFCPAYSEQVEQFLIPAMVYSKFPFPFVELIQSLLQQTSPIPNSSKR
TNVIEPSPWLLGSVIAFADKNIESLSVSDAADFLSVLKTLLPHLPAGVLESNNDSDSDSS
DEEDSVVMISKELREVAEECVKFLNSQKFVRCVVKCLNQEMDAHLLSSVCLICHSLMLQQ
HISIHRLRLLYSLAFNTKFMKALWITCTRVSNTTVTGSQITLLQTLSRGLEMSDEDMQRI
VPLLSVFCSMFSHSLYTLHDADFYGDMKSSKDSSMPFSLKELVPMVLMLRDTCLGIIELA
HPETQRSLTEDYREALRRTAMKDPRDWSVNNKETPYRHTKTWAYLFKVIATLVRQLYTRD
SRRRFCPPNSWLSDRVQIHADKPSQMYRARGSVFCRRPFGTMRHLTKVQIDDDGPPLSNT
DVKNLVILTELPFVVSFEERVKILQKLIQNDKDENQGDAHNFLSGPSINVSIRRNYIYED
AYDKLSPENEPNLKLKMRVQLMNAAGLDEAGIDGGGIFREFLSELLKTGFDPNRGLFLMT
TDRLLYPNPQSVSLMEKYTKHYYFLGRMLGKAIYENMLVEIPFATFFLSKILSRHGGDLD
IHHLASLDPEMYRNLLSLKTLNGKEVEDLGLNFTTVDDNFGIRKEVDLKYNGRNITVTEA
NKIEYIHLMADYKINKQIRTHCTAFRQGMADLINLEWLRMFDHHELQTLISGAMIPVNIQ
DLKQHTHYSGGYTINHPVIQNFWDVVENFTDTQKRQLLKFVTSCSRPPLLGFKDLFPAFC
VHFGGNEEDRLPTASTCMNLLKLPEFHDKETLRTKLTYAIESGAGFELS
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgtatagttttgaaggagattttcgaagaaaaccagttcaatctttaagaggggctagt
aaaaaggaacagacagattccttactaacaagagcaaaggcagagagagagagaagggag
gaaataagacaaaggcatagctcatcattaaaaattcagtctgcttatcgtggacatgtt
gtaaggaaaagacagagggaaatccttcgagatgagtatgataaacttatgagcagaggg
attgctgacccagcatctatcttcaatgccatcaggagactttgttatttctacaggaca
gactctggaaaagatcaggacagactgattcagctttgccagactgtcatcaagcagaaa
gatatgatcaagtcatcagtgacacagagtgggaagtctggtgtttttcttctccagcat
cttctgttactgtgtctaaagaacctgcagaatgcgtctgacactcgatcttggggtcct
ccaatgagaatgctggaaatatttacctctgtggatacctttaaagacaaaaagaagctt
ttgggaaacatttggatatttcttatcaaaaaggaatattttggatcaatgagacatctg
ttggaagctaaagtaccccagagtttggacaaatctcccactccacccacccctcaagca
gagagcatctttaacatgatcattagtcctattcagtttgctgttatgtccaaagataag
gaatttagtgatttggtactgaagagtgcctgtttttacctgttttgccctgcgtactct
gagcaagtggaacagtttctgatccctgccatggtttacagtaaattccccttccccttt
gtggagctgatacagtctctccttcagcagacctcccccatcccaaactcctcaaaaagg
acaaatgtcattgaaccatctccatggcttctgggatctgtaattgcttttgcagacaaa
aatattgagagtttgagtgttagtgatgctgcagactttttgtcggtacttaagacacta
ctaccacacctaccagctggtgtgttagagtccaacaacgacagcgacagtgacagtagt
gatgaggaggattctgtggttatgatctcaaaggaattgcgcgaagttgctgaagaatgt
gtgaagtttttaaattcccagaagtttgtgcgctgtgtggtgaaatgtttaaatcaagaa
atggacgctcatcttctctcctctgtctgtctgatatgtcattctctcatgctacaacag
catatctccattcacagacttaggttattgtatagtttagcttttaacacaaaatttatg
aaagcgttatggataacctgtactcgtgtatccaacactacagtcacaggatcccagatt
acattgctacagacactgtctcgtggactggagatgtcggatgaggacatgcagagaatc
gtccccctgctctctgtcttctgttccatgtttagccactcactttatacccttcatgat
gcagacttctatggagacatgaaaagcagcaaggatagcagcatgcccttctccttgaag
gagctggtgcccatggtgttaatgctgagggacacttgtctggggatcatagaactggcc
caccctgagacccagaggagtctgaccgaagactatagagaggctctccgcaggactgcc
atgaaggatccccgcgactggtcggtcaacaacaaagaaaccccttatagacacaccaaa
acatgggcatatttgttcaaggttattgcgaccctagtaagacagctttacaccagagat
tccagaagacgattctgtcctcctaactcctggctgtctgacagggtacagatacatgct
gataagccatctcagatgtacagagctagaggatccgtcttctgtcggcgtccatttggc
acaatgaggcacctcacaaaagtacagatagatgatgatggtcctccattatcaaacaca
gatgtgaagaatctggtgatactcactgaactcccatttgtggtttcatttgaggaaaga
gtcaagattttacagaagctcatacagaatgacaaggatgagaaccagggtgatgcccac
aacttcctgtcgggtccctccattaatgtgtccattcgacggaactacatctatgaggat
gcttatgacaaactctcaccagaaaacgaaccaaaccttaaacttaaaatgagagtgcag
ctcatgaatgcagcaggattagatgaagctggtatagatggtggcggaattttccgagaa
tttctttcggagctcctaaagacaggatttgatccaaacagaggcttgtttctaatgaca
acagacaggttgctgtatccaaatccacagtctgtgtctctgatggaaaaatataccaag
cattactacttcctgggacgcatgctgggcaaggccatatatgaaaacatgctggtggaa
attccttttgctactttctttttatccaaaattcttagtcgacacggaggtgacttggac
attcatcacctggcttctcttgaccctgaaatgtacaggaacttgttgtcactgaagaca
ttaaatggtaaagaagtggaggatctaggtttaaatttcacaacagtagatgacaatttt
ggaattaggaaggaggtagatttgaaatataatggaagaaatattactgtgactgaggca
aacaaaatagagtacatacacttgatggcagactacaaaataaacaagcagatcagaaca
cactgcacagcgttcaggcagggcatggccgacctaattaacttggagtggctgcggatg
tttgaccaccatgagcttcagacgctgatatctggtgctatgatccctgtcaacattcag
gacctgaagcaacacacacattactcagggggctatacaataaatcacccagtcatacag
aatttctgggatgtggtagaaaacttcacagacactcagaaacgtcaacttctgaagttt
gtcacaagctgctcaagacctccactgctaggcttcaaggatttgtttccagcattctgt
gtccattttggaggaaatgaggaggacagactccccacagcaagcacctgcatgaacctt
ctaaagctgcccgaattccatgacaaagagaccctcagaaccaaactcacatatgccatt
gagtcaggggcagggtttgaactgagttga
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