Magallana gigas (Pacific oyster): 105329748
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Entry
105329748 CDS
T03920
Name
(RefSeq) protein transport protein Sec24A isoform X1
KO
K14007
protein transport protein SEC24
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105329748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105329748
Membrane trafficking [BR:
crg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
105329748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
105329748
NCBI-ProteinID:
XP_011429418
UniProt:
K1RE81
LinkDB
All DBs
Position
7:complement(45930779..45943323)
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AA seq
1389 aa
AA seq
DB search
MADQHSQYKSSPNGPPNLNPYSQPVPMVPPGGLQSKNVQGQNMSRPPVPGNFPNNPMSVG
YNSSLNGHGTPPPMNKSPMQRMPPPMGSPANRFPSPMVNVSAPPQTFMNGPVNRPLNSNS
SQASGMPPHSLSASGNFSGGISSSPVPGVPRSSSANAMNNFNISQTNSHSNSPVPPNFSA
QPPGSIAEQRSASQQRIDTPPTEGGLPVPFHGQGQYSHQVGMSLTPGLTPNNSEPTSTRT
SRTSSPVETQSYEALEGGDFQSTQNQSFPGVGNDGQDQQKQNQPGASNTFNQGNVNRGSP
VTPRNPSTAIGGPPSSFTPNPTGQGGPPYPYQSQATTQGSITVQPGMAPMGIPPRMGTPT
SYGGQPPRQQRPPQPGYGQQGMGVPGSQMPPAGGQRPMGTPRPPMGRPPNPYNVPSMGGP
PSSAGGYTGMPPTSFTAQAPVTSMPGSFPPTSFSGQQVPIGGPPLPGSGGMYNSGPPSGP
TGMPPMRPSMPPSSTAPPGMPPMAKPGVPPSSTSYPQPPGMFPVSSGAPPPSSGMTQPPP
VGTPTQTQRGGMGATPTRPKYPQMPASSANTWQPGSQFPPQPSQPGAYQPNTQPGGFPQG
YPGSNAQPGVGQGGMPPSGIGNFPMSSQQSNLNSSFGSMSLQDRVVNLLNEKNLIPPEGL
EVVKPRLNNEFKKVNCQADVFRCTLTAIPQTSSLLNKARLPLGILIHPFKDLSQLPVIQS
SVIVRCRSCRTYINPFVYFVDSRRWKCNLCYRVNELPDEFSYDPVSKTYGEPQRRPEIKS
STIEFIAPSDYMLRPPQPAVYLFLLDVSFNAVETGYLSVFCQVLLEEIDKLPGDSRAQIG
FIAYDRALHFFNLAEGLSQPQMLTVSDIDDIFLPCPDNLLVNLHESKELILDLLNQIPSL
FEENLETGSALGAALQAAHKLVSPVGGRVTIMQTVLPTAGPGSLQSREDPSLRSGKNVTN
LGPATDFYKKLALECSAQQVAVDLFMLNGQYTDIASISCISKYSGGCVHHYPMFHAAKNP
SLTEKYEADLRRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAAF
GMQMSIEDSLVDTNTVCFQAALLYTSSKGERRIRVHTLCLPVTNQLSEIYAGADQQAIIG
LLAKMAVDRSVSSSLSDAREALINAAMDALASFGNTIPPAQRIGSLPICYTLRMIPTFIL
ALLKSKAFRVGVNTPLDDRVFGMQQCKSLPVGQLLKSVYADLYPVHGIEKYNTEKKGDIL
VPKLPLLHLSSANIDRTGVYLMDTFDTIYLYVGSGAPQDFVREVLDAPSFTAIPEGMIDL
PELENEKSEMMRNFITDLLDNRPGGASFYVIRDDSKRRLQFFEHMVEDRSESSMSLYEFL
QHLQKQVKS
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaacattcacagtacaagagcagtccaaatggaccgccgaatctaaaccct
tactcacaaccagtgcctatggtcccccctggaggattgcagtcaaaaaacgttcaagga
cagaacatgagtagaccaccagttccaggaaattttccaaataatccaatgtccgtggga
tataattcttctttgaatggtcatggtacaccccctcctatgaataagtcaccaatgcag
agaatgccacccccaatggggtcaccagcgaacaggtttccatcaccaatggtgaatgtt
tcagccccaccacagacatttatgaatggtccagtgaacaggcctttaaattcaaactca
tctcaagcttctggaatgcctccacattctctttcagcatctggaaatttttctggcgga
atttcttcttcaccagttcctggagtgccccgttcaagttctgcaaatgcaatgaacaat
tttaatatcagtcagactaattcccattcaaatagtccagttcccccaaatttttctgct
caacctccaggcagtatagctgagcaaagatctgcttctcaacagagaatagacacaccc
ccaacagagggaggtctgcctgtaccttttcacggacaaggtcaatattctcaccaagtg
ggcatgtctttaacccctggattaacacctaacaattcagaaccaacctccacgagaacc
tctaggacgtcctcccctgtagagacacagtcttatgaggctttggaaggaggagatttc
caaagcactcagaatcaatctttcccaggagttggtaatgacgggcaagatcaacagaag
caaaatcaacctggagctagtaacacttttaaccagggaaatgttaacagagggtcccca
gttacccccaggaatccctcaactgccataggaggtccaccatcatcattcacaccaaac
ccaacaggacagggcggtcccccttatccctaccaaagtcaagcaacaacccagggttct
ataactgtacagccaggaatggcccctatgggaataccaccaagaatgggaactcctaca
tcatatgggggtcaaccaccaagacagcagagacctccacagcctgggtatggtcaacaa
ggaatgggagtgcctgggagtcaaatgccacctgcaggaggtcaaagacccatgggtaca
cccagacctcccatgggacgaccacctaacccatacaatgttccctccatgggaggtcct
ccttcatcagctgggggttatacaggtatgcctcccacttcattcactgcccaggcacct
gtcacttcgatgcctggttcctttcctcccacatcatttagtggtcagcaggtacctatt
ggtggtcccccattaccaggaagtggagggatgtacaattcaggccccccatcaggaccc
acagggatgcctcctatgagaccttcaatgccgccatcaagtacagcaccaccagggatg
ccacccatggcaaaaccaggggtgccaccaagctctacaagttacccccagccaccaggt
atgtttcctgtatcatcaggagcaccaccaccatcctctggaatgacccagccaccacca
gtagggacccctactcagacgcaacgaggaggaatgggagccacacccacacgaccaaaa
tatccacaaatgccagcatcatctgctaatacttggcaaccagggagccaattccctcct
cagccatcccagccaggggcttaccagccaaatacacagcctggaggtttccctcagggt
tacccagggtcaaacgcacagccaggggtggggcaggggggaatgccgccatcaggcatt
ggaaacttccctatgtcctcccaacaaagcaatcttaattccagctttggctcaatgtcg
ctacaggacagagtagtgaatctattgaatgagaaaaacctcatccctcctgagggattg
gaagtggtgaaaccaagactaaacaatgagttcaaaaaggtcaactgtcaggcagatgta
ttccgatgcacattaactgctatacctcaaacctcaagtttattgaacaaagcaagactg
cctctaggaatattaattcatccatttaaagatttgtcgcaacttcctgtgattcagtcc
agtgttattgtccgctgtcggtcctgtcgcacatacatcaacccctttgtttactttgtg
gattctcggagatggaagtgcaacctctgttacagagtcaatgagttaccagatgagttt
tcctatgacccagttagtaaaacctatggtgagccccaaagaagacctgagataaagtcg
tctaccatagagttcatagctccatcagattatatgctgcgtccgccacagcctgctgtg
tacctgttcctgctggatgtctcctttaatgcggtagagacaggttacctgagtgttttc
tgccaggtgttgctggaggagatagacaagttaccaggagattccagggctcagatagga
tttattgcatatgacagggcattacatttctttaacctggctgagggactgtcccagcct
cagatgttgactgtatctgatatagatgacattttcctgccatgccctgataatcttcta
gtcaatttacacgagagcaaagagctgattcttgatttactgaatcagataccttcgttg
ttcgaagaaaatttggaaaccggaagtgctctgggtgccgcccttcaggctgcacacaaa
cttgtgagtcctgttgggggtcgggttacaatcatgcagacagtgctgcctaccgctgga
ccgggatctctacagtcaagagaggaccctagtctgcggtcaggaaagaatgtaacaaat
ctgggtccagcaacagacttttacaagaaactagcattagagtgctcagctcagcaagtg
gcagtggatctgtttatgctgaatggccagtatacagatatagcctctatatcttgtata
tccaagtattctggcggatgtgtccatcactaccctatgttccatgctgctaaaaacccg
tcactgactgagaagtatgaggcagatctgaggcggtatctaacaaggaagatcgggttt
gaagcagtgatgagaattagatgtaccaaaggtttgagtatccacacttttcatgggaac
tttttcgtgcgatccacggatcttctctccttacccaatgttaatccagatgctgcattt
ggaatgcagatgtctatagaagattctctagtagacacaaatacagtgtgtttccaagca
gcattgctctacacatcaagtaaaggtgagcgtagaataagggtccacacactgtgtctc
cctgttaccaaccagttatcagaaatctacgcaggagccgatcagcaagctatcattgga
cttctggccaaaatggctgtggacaggagtgtcagttcgtctttgtcggatgctagggag
gccctgatcaatgctgctatggatgccttggcatcgtttggtaacacgattcctccagct
caaaggataggaagtctacccatctgttacactctcagaatgatacccacatttatactg
gctctgctcaaaagtaaagctttccgtgtgggcgtgaacacacctttagatgatcgagtg
tttggcatgcagcagtgcaagagtttgcctgtcggtcagcttctgaagtccgtgtacgca
gacctttatcctgtccatggcattgaaaaatataatacagaaaagaagggtgacattctt
gttcccaagctacctttgcttcacctgtcctctgctaacattgatcggacaggtgtatac
ctgatggacacctttgacaccatttacctgtatgttggcagtggtgctccacaagacttt
gtcagggaagttctggatgcacctagctttactgccattcctgaaggcatgattgatctg
ccagagttagagaatgagaagtctgagatgatgaggaattttatcaccgacttgttagat
aaccgaccaggaggagcaagtttctacgtgatcagagacgacagcaagaggagactacag
ttctttgagcacatggtggaggatcggtctgaatcgtccatgtctctgtacgaattcctg
cagcacctacagaagcaggtcaagagttga
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