Magallana gigas (Pacific oyster): 105329756
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Entry
105329756 CDS
T03920
Name
(RefSeq) D-glucuronyl C5-epimerase B isoform X2
KO
K01793
heparosan-N-sulfate-glucuronate 5-epimerase [EC:
5.1.3.17
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
crg01100
Metabolic pathways
Module
crg_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
105329756
Enzymes [BR:
crg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.17 heparosan-N-sulfate-glucuronate 5-epimerase
105329756
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Motif
Pfam:
C5-epim_C
Glce_b_sandwich
Motif
Other DBs
NCBI-GeneID:
105329756
NCBI-ProteinID:
XP_011429445
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Position
3
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AA seq
604 aa
AA seq
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MLWWQNFISKMPRASLKHLLVFLGITTLLVTVYNIGKCDIARNDSNFYREEKLPHLDGNF
GGTKGFQPRVAHSYDIAKEKQPIEYEEIDCIINEDYTVKGRKEGSEVYMPFSFIQKYFEV
YGDIDKSDGYERFSFHHSYQDDFPTGPQPRYSPSGVFMSFDLYSVEDRNRVKCVSGIEGV
PISTQWDHKGHYYPIQIAQFGLSHYSKHLIQPKNKVKILEDGERTDLSDWLLPDQKSEIR
SKLDDRTYLDNGVVEFQTSPSMKNPGISISTREKKLSTLSMDLNFINNGSITVVIQMGDG
NLYRIHYVLSDTVMRQDGNRDLYYGLGSSKKGKWFHLTRLLLVDFQKGMNLMYSKTRGAR
MKNSARITAICVRGRGVMDNVTLSAHAHMDLFFDAANYLVRHQNSIGGWPVMVPRKLIPE
VMELDSGWYSAMGQGQAISLLVRAYVVSKDVKYIDAAGKALSVFDIPSYQGGITSKYLNT
YEWYEEYPTSPSSFVLNGFMYSLIGLYDLRETATGKIREKASELFNRGMRTLKAMLLLFD
SGTGTFYDLRHITAGLAPNRARWDYHKVHINQVQLLSEVDSDPLFTSTAERWKGYMKGKL
SPHN
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgctctggtggcagaattttatctcaaaaatgccccgagcaagcttaaaacatttgctc
gtatttttgggcatcaccacacttctggtaactgtgtacaatattggaaaatgtgatatt
gccagaaacgacagtaacttctatcgggaagaaaaattgccacatcttgatggtaatttt
ggtggcactaaaggttttcagccacgagtagctcattcatatgacattgctaaagagaag
caacccatagaatatgaggaaatagattgtattataaatgaggattatacagttaaaggg
agaaaagagggcagtgaagtgtacatgccattttcattcatacagaaatattttgaggtt
tatggagatatagataagtcggacgggtacgagaggttttccttccaccacagttaccag
gatgatttccccactggtccccagcccaggtactcccccagtggagtcttcatgtccttt
gacctttacagtgtagaggacaggaacagagtgaaatgtgtcagtgggatagaaggtgtc
ccaatatccacacaatgggatcacaaaggtcactattatccaatacagattgcacagttt
ggattaagtcactacagtaaacacttaatccagcccaaaaacaaggtcaaaatactggag
gatggagagcgtacagacttatcagactggctactcccagatcaaaagtcggaaatccgc
agcaaactggatgaccgtacttacctggataatggagtggtggaattccaaacatctcca
agcatgaaaaatccaggaatcagcatatcaacgagagagaaaaagttgtctactctttct
atggatctcaacttcatcaacaatggcagtataactgtagttattcagatgggggatggg
aatttgtatcgtattcactatgtgctcagtgacacagtcatgaggcaagacggcaacaga
gacctttactatgggcttggatcttccaagaaagggaagtggttccatttaacaagactt
cttctggttgattttcaaaagggaatgaacttgatgtattccaaaactcgtggtgctaga
atgaagaatagtgctcgtattacagccatttgtgttcgcggccgtggtgttatggacaat
gtcacactttctgcacatgctcatatggacctgtttttcgatgctgcaaattacttagtg
cggcatcaaaattccattggcggttggcctgtcatggttcctcgcaaactcattccagag
gtcatggagcttgactctggctggtactcggccatgggtcaaggtcaagcaatatctctc
cttgtgcgtgcctatgttgtctcaaaagacgtaaagtacattgacgcagcaggcaaagcc
ctcagtgtttttgacattccaagttaccaagggggaataacttccaaatacctcaacact
tatgagtggtatgaagagtaccccacctcgcctagtagttttgtgctcaatggattcatg
tactctttgatagggctttacgacttaagagaaacagcaacaggaaaaatcagagagaaa
gcatcagagttattcaacagagggatgaggactttaaaggccatgcttctattgtttgat
tctggaacaggtacattctatgacctacgacatatcactgcgggtctagcgccgaaccga
gccaggtgggactatcacaaagttcatatcaaccaggtacagttgctgagtgaagtggac
agtgatccactgtttaccagtacagcagagagatggaaagggtacatgaaagggaagctg
tcgccccacaattag
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