Magallana gigas (Pacific oyster): 105329842
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Entry
105329842 CDS
T03920
Name
(RefSeq) vesicle-trafficking protein SEC22b
KO
K08517
vesicle transport protein SEC22
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04130
SNARE interactions in vesicular transport
crg04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
105329842
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105329842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105329842
Membrane trafficking [BR:
crg04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
105329842
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Motif
Pfam:
Longin
Synaptobrevin
AF0631_C
DUF7192
Mad3_BUB1_I
YnzI
CNP_C_terminal
Motif
Other DBs
NCBI-GeneID:
105329842
NCBI-ProteinID:
XP_011429609
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All DBs
Position
2:34038900..34046809
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AA seq
217 aa
AA seq
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MVLMTLIARVADALPLAASMQEDEQQGRDLMDYQNQAKQLFRKLSQDPQPPARCSLETGP
FIFHYVIERGVCFLVLCEHSFSKRLAFSFLEDLQTEFTSNYGQKVDSVSRPYSFIEFDSY
IKKSRKNYMDSRARKNLSNINTELQDVHRIMVQNIEDVLVRGESLSALDSKASNLSVISQ
KYRKDARYLNLRSTYAKIAAIVIVIIVLLLFLRYTIW
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcatgacattgatagcgagggttgctgacgcccttccactagcggcgtccatg
caggaagatgagcagcaaggaagagaccttatggattaccagaatcaagccaagcagctg
ttcagaaaactctcccaagacccacaacccccagcccgctgtagtctggagacgggacca
tttatatttcattacgtcattgagagaggtgtgtgtttcctagtcctgtgtgaacactct
ttctccaaaagactggcgttttccttcttagaagatctacaaacggagtttacatcaaac
tatggacaaaaagtagactctgtgtcacgaccatatagctttatagagtttgactcttat
atcaaaaagtcgaggaagaattacatggactcacgggccaggaagaacctgtcgaacatt
aacactgagttacaagacgtacacagaataatggtccaaaacattgaagatgtacttgtg
aggggcgagtcattatctgctctggacagtaaggccagtaatttatcagtcatttctcag
aaatacaggaaggacgcccgctacctgaatctgaggtccacgtacgctaaaatagcagct
attgtcatcgtgatcatcgttctgctgctcttcctgaggtacaccatttggtga
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