KEGG   Magallana gigas (Pacific oyster): 105329976
Entry
105329976         CDS       T03920                                 
Name
(RefSeq) mRNA export factor GLE1
  KO
K18723  nucleoporin GLE1
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg03013  Nucleocytoplasmic transport
crg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105329976
   03015 mRNA surveillance pathway
    105329976
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crg03019]
    105329976
Messenger RNA biogenesis [BR:crg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     105329976
SSDB
Motif
Pfam: GLE1 Vip3A_N
Other DBs
NCBI-GeneID: 105329976
NCBI-ProteinID: XP_034336304
LinkDB
Position
3:complement(54115509..54123916)
AA seq 775 aa
MASIVCLLKASPKGQLKYESDPNIEKEYFDKYLSPPKLSRPHQEVSSENSFCYHDEDERY
SEDTSESDISESIRNLRVEVTCRNDKRKTQKKVQFTTRNNSLVHDMRIQVDKEKAGFPDP
HNKNGHDRNLKISFNGSGGEANFKKNGCGMLIEKPLDRPSLSKEQTRKIVVSPEYNKSRR
DIQFYEEELNSKSKMKLEQKRDQFKKAERRINERAEQRINEFENSRLEKARNQQLMLEQE
ERERSAKLIEKQKKIIKDHIEYAKRVEQKKERIQEEIKKKEEEKLMIWDKTKTIVSECKT
ILDRIKTLYTSYAAKLPENVAKAVHNGQQRYHMSQQIVAVEDRVPDISNKQLVTITENFR
LLSNTLDFVQQAIQEVKEREKREAEAKAEEEAKKKAEEEAARRVQPPPAVEHPGQPLDSS
TPIPGDTGSGHQGAPPGATAPPTPPTSVAQVRPQEGEVLCVDVVAFQEYTRLQQKLKDTE
TAIQVLSSTSQLKKLKFDLQKAVNIPVNAISAVSGAHMRDKLQRLLVLLSGQQLEIANKR
VSVNEHPAALTFCKHLIAKMVVKKGEEQVSSIFESAFPLAAVTVGILAEHPDIKDLLLAH
FQLMCPYTVPYHIPRQEGQSTKDVHIARGYKYDSDGNVEKQDKFLKRMSGIMRLYASLMV
SYPPRRQSEHPFGIENAWLWLSRVMNIQPLPDITATMVFDLLEVTGHALYKEYRKQFLKM
LHILIREFLPKLKSVASSGGGGPVSRLEALIMASIQRQGQIPPPEGILSPNFWFS
NT seq 2328 nt   +upstreamnt  +downstreamnt
atggcgagtattgtttgtctgttaaaagcctcgccaaagggacaactgaaatatgaaagc
gatccaaatattgaaaaggaatattttgacaaatatttgtcaccaccaaaattgagtagg
cctcaccaagaagtctcatcagagaacagtttttgttaccatgatgaagatgagcgatac
tcagaagacacttcagaaagtgacatttctgaatccattcgaaatctccgagttgaggtt
acatgtagaaacgacaaaaggaaaacacaaaagaaagttcaattcaccacaagaaacaac
agcttagtccatgatatgagaatacaagttgacaaggagaaggcaggttttcccgatcca
cacaataagaatggtcatgatagaaatttaaaaatcagctttaacggtagtggaggtgaa
gcaaacttcaagaagaatggatgcggaatgttgattgagaaaccgttagatcgtccatcc
ctcagtaaggagcagaccaggaagatcgtagtgtctccagagtataacaagagtaggcga
gacattcagttttatgaagaggagctcaatagcaaatctaagatgaagctcgaacagaag
agggaccagtttaagaaagctgagaggagaatcaatgagagagcagaacagaggatcaat
gagtttgagaacagtcgactggagaaggccaggaatcaacagctgatgctagagcaggag
gaacgagagaggtcagcaaaattaattgaaaaacagaaaaagataataaaagatcatata
gagtatgcaaagagggtggaacagaagaaagagagaattcaggaagaaataaagaaaaaa
gaggaagaaaagttgatgatctgggataaaacaaagactatagtgagtgaatgcaaaacc
atcctagatagaataaaaacactgtacacatcctatgcagccaaactgccagagaatgtt
gctaaagcagttcacaatggccagcagagataccacatgtctcagcagatcgtggctgta
gaggatagggtcccagacatcagcaacaaacagctggtcaccatcacagagaacttccgc
ctcctctcaaacacgctggactttgtccaacaggctatccaagaagtaaaggaaagagaa
aaaagggaagccgaggcaaaggcagaagaggaagcgaagaagaaagcagaggaggaggcg
gccaggagggtacagccaccccctgctgttgaacacccagggcagccattggattcctcc
actccaatacctggagacactggatcaggacatcagggggcaccacctggggcaaccgct
ccccccacacctcccacatcggtcgcacaagtcagaccccaagagggggaggtactgtgt
gtggatgtagtggctttccaggagtacacacgattacagcagaagctgaaagacacggag
acagctatacaggtgctgtcatctacgtcacagttgaaaaagctgaagtttgacctccag
aaggcggtgaacatacctgtgaacgctatctcagcagtaagtggggcccacatgagagac
aagctacagcgcctcctggtgttactctccggccaacaattggagatagccaacaaaaga
gtctcggtcaatgagcacccagcggccttgaccttctgtaaacacctcattgcaaagatg
gtagtgaaaaaaggagaggagcaggtctcctcgatctttgagtcagcctttcccctggcg
gcggtgacggtagggatactggccgaacacccagacatcaaggacctcctgctggcacac
ttccagctgatgtgtccgtacaccgtcccctaccacatcccccgtcaggagggtcagtcc
actaaggatgtccatatagcgagagggtacaaatacgacagcgatggtaatgtggagaaa
caggacaaattcctgaaaaggatgtctggaattatgcgactgtacgcctctcttatggtc
tcttatccaccaaggcgacaaagtgaacatccttttgggattgaaaatgcctggttatgg
ctgtcaagagtgatgaacattcagccgcttccagacataacggctaccatggtgtttgac
cttttagaggtcaccggacatgccctttataaggaatacagaaaacaatttttgaaaatg
cttcatattctgattcgtgaattccttcccaagctcaaatctgtggcatcttcaggggga
ggaggccctgtgtctcgactagaggcactgatcatggctagtatacagcgacagggacaa
attccaccaccagagggcatcctgtccccaaacttctggttctcttga

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