Magallana gigas (Pacific oyster): 105329976
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Entry
105329976 CDS
T03920
Name
(RefSeq) mRNA export factor GLE1
KO
K18723
nucleoporin GLE1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03013
Nucleocytoplasmic transport
crg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105329976
03015 mRNA surveillance pathway
105329976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105329976
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105329976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Vip3A_N
Motif
Other DBs
NCBI-GeneID:
105329976
NCBI-ProteinID:
XP_034336304
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Position
3:complement(54115509..54123916)
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AA seq
775 aa
AA seq
DB search
MASIVCLLKASPKGQLKYESDPNIEKEYFDKYLSPPKLSRPHQEVSSENSFCYHDEDERY
SEDTSESDISESIRNLRVEVTCRNDKRKTQKKVQFTTRNNSLVHDMRIQVDKEKAGFPDP
HNKNGHDRNLKISFNGSGGEANFKKNGCGMLIEKPLDRPSLSKEQTRKIVVSPEYNKSRR
DIQFYEEELNSKSKMKLEQKRDQFKKAERRINERAEQRINEFENSRLEKARNQQLMLEQE
ERERSAKLIEKQKKIIKDHIEYAKRVEQKKERIQEEIKKKEEEKLMIWDKTKTIVSECKT
ILDRIKTLYTSYAAKLPENVAKAVHNGQQRYHMSQQIVAVEDRVPDISNKQLVTITENFR
LLSNTLDFVQQAIQEVKEREKREAEAKAEEEAKKKAEEEAARRVQPPPAVEHPGQPLDSS
TPIPGDTGSGHQGAPPGATAPPTPPTSVAQVRPQEGEVLCVDVVAFQEYTRLQQKLKDTE
TAIQVLSSTSQLKKLKFDLQKAVNIPVNAISAVSGAHMRDKLQRLLVLLSGQQLEIANKR
VSVNEHPAALTFCKHLIAKMVVKKGEEQVSSIFESAFPLAAVTVGILAEHPDIKDLLLAH
FQLMCPYTVPYHIPRQEGQSTKDVHIARGYKYDSDGNVEKQDKFLKRMSGIMRLYASLMV
SYPPRRQSEHPFGIENAWLWLSRVMNIQPLPDITATMVFDLLEVTGHALYKEYRKQFLKM
LHILIREFLPKLKSVASSGGGGPVSRLEALIMASIQRQGQIPPPEGILSPNFWFS
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtattgtttgtctgttaaaagcctcgccaaagggacaactgaaatatgaaagc
gatccaaatattgaaaaggaatattttgacaaatatttgtcaccaccaaaattgagtagg
cctcaccaagaagtctcatcagagaacagtttttgttaccatgatgaagatgagcgatac
tcagaagacacttcagaaagtgacatttctgaatccattcgaaatctccgagttgaggtt
acatgtagaaacgacaaaaggaaaacacaaaagaaagttcaattcaccacaagaaacaac
agcttagtccatgatatgagaatacaagttgacaaggagaaggcaggttttcccgatcca
cacaataagaatggtcatgatagaaatttaaaaatcagctttaacggtagtggaggtgaa
gcaaacttcaagaagaatggatgcggaatgttgattgagaaaccgttagatcgtccatcc
ctcagtaaggagcagaccaggaagatcgtagtgtctccagagtataacaagagtaggcga
gacattcagttttatgaagaggagctcaatagcaaatctaagatgaagctcgaacagaag
agggaccagtttaagaaagctgagaggagaatcaatgagagagcagaacagaggatcaat
gagtttgagaacagtcgactggagaaggccaggaatcaacagctgatgctagagcaggag
gaacgagagaggtcagcaaaattaattgaaaaacagaaaaagataataaaagatcatata
gagtatgcaaagagggtggaacagaagaaagagagaattcaggaagaaataaagaaaaaa
gaggaagaaaagttgatgatctgggataaaacaaagactatagtgagtgaatgcaaaacc
atcctagatagaataaaaacactgtacacatcctatgcagccaaactgccagagaatgtt
gctaaagcagttcacaatggccagcagagataccacatgtctcagcagatcgtggctgta
gaggatagggtcccagacatcagcaacaaacagctggtcaccatcacagagaacttccgc
ctcctctcaaacacgctggactttgtccaacaggctatccaagaagtaaaggaaagagaa
aaaagggaagccgaggcaaaggcagaagaggaagcgaagaagaaagcagaggaggaggcg
gccaggagggtacagccaccccctgctgttgaacacccagggcagccattggattcctcc
actccaatacctggagacactggatcaggacatcagggggcaccacctggggcaaccgct
ccccccacacctcccacatcggtcgcacaagtcagaccccaagagggggaggtactgtgt
gtggatgtagtggctttccaggagtacacacgattacagcagaagctgaaagacacggag
acagctatacaggtgctgtcatctacgtcacagttgaaaaagctgaagtttgacctccag
aaggcggtgaacatacctgtgaacgctatctcagcagtaagtggggcccacatgagagac
aagctacagcgcctcctggtgttactctccggccaacaattggagatagccaacaaaaga
gtctcggtcaatgagcacccagcggccttgaccttctgtaaacacctcattgcaaagatg
gtagtgaaaaaaggagaggagcaggtctcctcgatctttgagtcagcctttcccctggcg
gcggtgacggtagggatactggccgaacacccagacatcaaggacctcctgctggcacac
ttccagctgatgtgtccgtacaccgtcccctaccacatcccccgtcaggagggtcagtcc
actaaggatgtccatatagcgagagggtacaaatacgacagcgatggtaatgtggagaaa
caggacaaattcctgaaaaggatgtctggaattatgcgactgtacgcctctcttatggtc
tcttatccaccaaggcgacaaagtgaacatccttttgggattgaaaatgcctggttatgg
ctgtcaagagtgatgaacattcagccgcttccagacataacggctaccatggtgtttgac
cttttagaggtcaccggacatgccctttataaggaatacagaaaacaatttttgaaaatg
cttcatattctgattcgtgaattccttcccaagctcaaatctgtggcatcttcaggggga
ggaggccctgtgtctcgactagaggcactgatcatggctagtatacagcgacagggacaa
attccaccaccagagggcatcctgtccccaaacttctggttctcttga
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