Magallana gigas (Pacific oyster): 105330248
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Entry
105330248 CDS
T03920
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25 isoform X1
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crg03021
]
105330248
Transcription machinery [BR:
crg03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
105330248
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med25_VWA
Med25
Motif
Other DBs
NCBI-GeneID:
105330248
NCBI-ProteinID:
XP_011430155
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All DBs
Position
5:19616441..19625849
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AA seq
752 aa
AA seq
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MVVGSEQKANPADVVLVVEATANLSAYIDVLKKYYIIPSLEVFNGGPPDPTDIGHDYSCS
LYNLVTFFSADVIPDTTSRCSGVTTNIHEFITWLDDLPLIGGGGESCSHITEGLSTALHV
FDDLQKVRIDIGLPVQRHCILVCNSPPYNLPSQEGVRYVGYMADQLASMMAKRGIHLSII
SPRKIPALQKLYEESTLPTDMSAPVKDFTTDPRHLVLLHGFQLEERAHSPAGDHVNIEKP
AENKNPSSPAPPSFAPSTGFSPAPSLSEDSTEFKKPNTTSGGTPFGTQDSIASSMPSLPS
PQQPQMSQPSPSQGISMQHSPAMPQMQQNPPQQQPQQQPMVSQPQVTNQMPPQSQYDPMK
MQNMMPNDMQNRSTAMATNPINQPVFSQPTMDQQPNVNMPAQPGQPNPMKDRKIIWQGIL
EWQEKMKAGGPQTPKVNRQLQCHLSIGQADPDINAMNWPKVLIMQLIPQSLLNSTQLQPL
FKNSRQVAFHFGSQNLDDLRNLYKVMGTGFAGCVHFPAGSQCEVRVLLLLFSNKRRAFIG
LIPNDQTAFVNGIRSVIYSHKIRQQQQQQRPDQQPQMPQQTGFPGPQQTMPNQPVQNPQG
AQFGVQQMPQVSMQNPMMTQQQANMQKQMQATQIAKQQEQQKLLAQQRLQQQRQLQMQQM
QQQQQQQQQPGLNNQQQQQLTQLLMQQQQQGQRQPQMIITQGRGGQILHQGHQQVMGGGQ
VLQGNMPQMAQQGPSSAPQGGNMFDDLNMEFL
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtagggtcagaacagaaagctaacccagccgatgttgttctggttgttgaggcc
actgcaaatcttagtgcctacattgatgtactgaagaaatactacattattccttctctg
gaagttttcaatggaggccctcctgatccaacagacattgggcatgattacagttgttcg
ctatacaatcttgtcacattcttttcggctgatgttattcccgacacaacttcaagatgt
tccggtgtaacaacaaatattcatgaattcatcacctggttggatgatttaccattaatt
ggaggaggcggggagtcgtgtagtcacataacagaggggttgagtacagctctacatgtt
ttcgatgatctgcagaaagttcgaatagatattggattacctgtgcagcgacactgtata
ttggtatgcaattctcctccgtacaatctccccagccaggaaggtgttcgctatgtgggg
tacatggcagaccaattagccagcatgatggccaagagagggatacacctttcaattatc
tctccaagaaaaattccagctcttcagaagctgtatgaagagtcaactctacccacagac
atgtctgccccagtcaaagacttcaccacagacccccgccatcttgtgttactgcatggg
ttccaactggaggagagagcccacagtccagctggggaccatgtcaacatagagaagcct
gcagaaaataaaaacccatctagtcctgcacccccaagctttgccccctccacaggattt
tcaccagccccttcactgagtgaggattctacagaattcaaaaaacccaacacgacatct
ggtggaactccattcggtacacaagactccattgcatccagtatgccatctttgccatct
ccacagcaacctcaaatgagccagccatccccctcccaaggaatctccatgcagcacagt
ccagcaatgccacagatgcagcagaacccgcctcagcaacaaccccaacaacaaccaatg
gtatcacagccccaagtaaccaatcaaatgccaccacagtctcagtatgatccaatgaaa
atgcagaacatgatgccgaatgacatgcagaataggagcacagcaatggccaccaatccc
atcaaccaacccgtgttttcccagcccacgatggatcaacaacccaatgtgaacatgccc
gcacagcccggtcagcccaacccgatgaaggacaggaaaatcatctggcaagggatcctt
gagtggcaggagaagatgaaggcggggggaccccagacccccaaagtcaaccgccagctc
cagtgtcacctgtccataggtcaggccgacccagatataaatgccatgaactggccgaag
gtcctgataatgcagttgatcccccagtccctgttgaactccactcagctgcagcctctc
tttaaaaactcccgccaggtggccttccactttggcagtcagaaccttgacgacctaagg
aatctgtacaaagtcatgggcactggttttgctggttgtgtacactttccagctgggagt
cagtgtgaggttcgcgtattactgttgttgttcagcaacaaaagaagagcctttattgga
cttatccccaatgaccagactgcgtttgttaacgggataaggagtgttatctactcccac
aaaatcaggcaacaacaacagcagcaaagaccggatcaacaaccacaaatgccacagcag
acagggtttcctgggccacagcaaaccatgcccaaccaaccagtgcagaatccccaaggg
gcccaatttggggtacaacagatgccacaggttagcatgcagaatcccatgatgactcaa
caacaggcgaacatgcaaaagcaaatgcaggcaacacagatagcaaaacagcaagaacaa
cagaagctactggcacaacaaagattacagcaacaaaggcaactccaaatgcaacagatg
cagcagcagcaacagcagcagcaacaacctggtctcaacaatcagcagcaacaacagctg
actcaattgctgatgcaacagcagcaacagggccagagacaaccccagatgatcatcacc
caagggcgaggcggtcagattctacaccagggacaccaacaagtaatggggggtgggcag
gtgctccagggaaacatgccccaaatggctcaacagggcccctcgtccgctcctcagggg
ggtaacatgtttgatgatctgaatatggaattcttatga
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